CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G434203
(
Zea mays
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GRMZM2G434203
T002240_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF027
M06566_2.00
Arabidopsis thaliana
NNNNNNHNNHNYYRCCGACAN
NTGTCGGYRRNDNNDNNNNNN
Dap-seq
OMalley et al.(2016)
AT1G12630_col_a
0.683
0.875
ERF027
M06567_2.00
Arabidopsis thaliana
NNYYRCCGACANHNNN
NNNDNTGTCGGYRRNN
Dap-seq
OMalley et al.(2016)
AT1G12630_colamp_a
0.683
0.875
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G434203_P01
AP2
91
140
FYRGIRCRSGKWVSEIREPRKARRIWLGTYPMAEMAAAAYDVAARALRGA
Links
Other
AP2
family TFs
Other
Zea mays
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA008802
Oryza indica
BGIOSGA008802
I
0.744
GRMZM2G000520
Zea mays
GRMZM2G000520
I
0.744
LPERR02G22600
Leersia perrieri
LPERR02G22600
I
0.744
OBART02G27750
Oryza barthii
OBART02G27750
I
0.744
OGLUM02G28310
Oryza glumaepatula
OGLUM02G28310
I
0.744
OMERI02G26970
Oryza meridionalis
OMERI02G26970
I
0.744
ONIVA02G30630
Oryza nivara
ONIVA02G30630
I
0.744
OPUNC02G25450
Oryza punctata
OPUNC02G25450
I
0.744
ORUFI02G29210
Oryza rufipogon
ORUFI02G29210
I
0.744
OS02G0676800
Oryza sativa
OS02G0676800
I
0.744
Sb04g031960
Sorghum bicolor
Sb04g031960
I
0.744
Si018039m.g
Setaria italica
Si018039m.g
I
0.744
Pavir.Ab02683
Panicum virgatum
Pavir.Ab02683
I
0.744
MLOC_62554
Hordeum vulgare
MLOC_62554
N
0.705
Traes_6DL_FD6D63D1A
Triticum aestivum
Traes_6DL_FD6D63D1A
N
0.705
BRADI3G51610
Brachypodium distachyon
BRADI3G51610
N
0.703
Gorai.003G162600
Gossypium raimondii
Gorai.003G162600
I
0.687
ERF027
Arabidopsis thaliana
AT1G12630
D
0.683