Gorai.003G162600 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.003G162600 T008508_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G63040
M06590_2.00 		Arabidopsis thaliana
TTGAAA
TTTCAA		 Dap-seq
OMalley et al.(2016)
AT1G63040_col_a 		0.722 0.898
ERF027
M06566_2.00 		Arabidopsis thaliana
NNNNNNHNNHNYYRCCGACAN
NTGTCGGYRRNDNNDNNNNNN		 Dap-seq
OMalley et al.(2016)
AT1G12630_col_a 		0.692 0.898
ERF027
M06567_2.00 		Arabidopsis thaliana
NNYYRCCGACANHNNN
NNNDNTGTCGGYRRNN		 Dap-seq
OMalley et al.(2016)
AT1G12630_colamp_a 		0.692 0.898
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.003G162600.1 AP2 10 60

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_016176 Theobroma cacao TCM_016176 I 0.734
Carubv10022214m.g Capsella rubella Carubv10022214m.g I 0.725
Cagra.6357s0007 Capsella grandiflora Cagra.6357s0007 I 0.725
AT1G63040 Arabidopsis thaliana AT1G63040 D 0.722
Cla011673 Citrullus lanatus Cla011673 I 0.720
fgenesh1_pm.C_scaffold_1001063 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001063 I 0.715
Cucsa.302760 Cucumis sativus Cucsa.302760 I 0.715
scaffold_101390.1 Arabidopsis lyrata scaffold_101390.1 I 0.715
Thhalv10009659m.g Eutrema salsugineum Thhalv10009659m.g I 0.714
Carubv10012147m.g Capsella rubella Carubv10012147m.g I 0.714
Aquca_013_00433 Aquilegia coerulea Aquca_013_00433 I 0.714
Solyc08g080290.2 Solanum lycopersicum Solyc08g080290.2 I 0.713
PGSC0003DMG400022759 Solanum tuberosum PGSC0003DMG400022759 I 0.713
LPERR02G22600 Leersia perrieri LPERR02G22600 I 0.709
Sb04g031960 Sorghum bicolor Sb04g031960 I 0.709
Si018039m.g Setaria italica Si018039m.g I 0.709
Pavir.Ab02683 Panicum virgatum Pavir.Ab02683 I 0.709
BGIOSGA008802 Oryza indica BGIOSGA008802 I 0.709
Cagra.0568s0175 Capsella grandiflora Cagra.0568s0175 I 0.709
OS02G0676800 Oryza sativa OS02G0676800 I 0.709
GRMZM2G000520 Zea mays GRMZM2G000520 I 0.709
OBART02G27750 Oryza barthii OBART02G27750 I 0.709
OGLUM02G28310 Oryza glumaepatula OGLUM02G28310 I 0.709
ONIVA02G30630 Oryza nivara ONIVA02G30630 I 0.709
OMERI02G26970 Oryza meridionalis OMERI02G26970 I 0.709
OPUNC02G25450 Oryza punctata OPUNC02G25450 I 0.709
ORUFI02G29210 Oryza rufipogon ORUFI02G29210 I 0.709
Bostr.13671s0198 Boechera stricta Bostr.13671s0198 I 0.706
Cla004491 Citrullus lanatus Cla004491 I 0.701
Al_scaffold_0240_1 Arabidopsis lyrata Al_scaffold_0240_1 I 0.696
Bra027615 Brassica rapa Bra027615 I 0.696
Al_scaffold_0002_210 Arabidopsis lyrata Al_scaffold_0002_210 I 0.696
Bra027616 Brassica rapa Bra027616 I 0.696
30147.m014311 Ricinus communis 30147.m014311 I 0.695
Bo9g036590 Brassica oleracea Bo9g036590 I 0.695
Bo9g028820 Brassica oleracea Bo9g028820 I 0.693
ERF027 Arabidopsis thaliana AT1G12630 D 0.692
MDP0000189347 Malus domestica MDP0000189347 I 0.692
Ciclev10023840m.g Citrus clementina Ciclev10023840m.g I 0.688
GRMZM2G434203 Zea mays GRMZM2G434203 I 0.687
Traes_6DL_FD6D63D1A Triticum aestivum Traes_6DL_FD6D63D1A N 0.679
MLOC_62554 Hordeum vulgare MLOC_62554 N 0.679
orange1.1g030591m.g Citrus sinensis orange1.1g030591m.g N 0.678