OB04G26560 (Oryza brachyantha)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OB04G26560 T003011_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.824 0.920
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.824 0.920
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.808 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB04G26560.1 AP2 204 255

Links

Other AP2 family TFs
Other Oryza brachyantha TFs

436 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1177_YBR049C Saccharomyces paradoxus 1177_YBR049C I
746_YFL003C Saccharomyces bayanus 746_YFL003C I
AACERI_AaceriABL092W Saccharomycetaceae sp ashbya aceri AACERI_AaceriABL092W I
AGOS_ABL092W Ashbya gossypii AGOS_ABL092W I
Ecym_5138 Eremothecium cymbalariae Ecym_5138 I
KAFR_0E01200 Kazachstania africana KAFR_0E01200 I
KLTH0C07788g Lachancea thermotolerans KLTH0C07788g I
KLTH0C07788g Kluyveromyces thermotolerans KLTH0C07788g I
KNAG_0H01320 Kazachstania naganishii KNAG_0H01320 I
Kwal_22993 Kluyveromyces waltii Kwal_22993 I
LALA0_S02e08900g Lachancea lanzarotensis LALA0_S02e08900g I
LELG_04897 Lodderomyces elongisporus LELG_04897 I
NCAS_0A10470 Naumovozyma castellii NCAS_0A10470 I
NCAS_0I01690 Naumovozyma castellii NCAS_0I01690 I
NDAI_0A05820 Naumovozyma dairenensis NDAI_0A05820 I
NDAI_0A06300 Naumovozyma dairenensis NDAI_0A06300 I
SKUD_123301 Saccharomyces kudriavzevii SKUD_123301 I
SKUD_176006 Saccharomyces kudriavzevii SKUD_176006 I
TDEL_0D03690 Torulaspora delbrueckii TDEL_0D03690 I
REB1 Saccharomyces cerevisiae YBR049C D