LELG_04897 (Lodderomyces elongisporus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 LELG_04897 T273582_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REB1
M00063_2.00 		Saccharomyces cerevisiae
RTTACCCG
CGGGTAAY		 PBM
Badis et al.(2008)
REB1_4402 		0.665 0.571
REB1
M07491_2.00 		Saccharomyces cerevisiae
RTTACCCKN
NMGGGTAAY		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0363.1 		0.665 0.571
REB1
M07553_2.00 		Saccharomyces cerevisiae
NVTTACCCKVH
DBMGGGTAABN		 ChIP-exo
Rhee et al.(2011)
Reb1_1 		0.665 0.571
REB1
M07554_2.00 		Saccharomyces cerevisiae
YACCACWMCCACWYACCMHMC
GKDKGGTRWGTGGKWGTGGTR		 ChIP-exo
Rhee et al.(2011)
Reb1_2 		0.665 0.571
REB1
M07555_2.00 		Saccharomyces cerevisiae
TYTCACATTCCACTCCAYKSC
GSMRTGGAGTGGAATGTGARA		 ChIP-exo
Rhee et al.(2011)
Reb1_3 		0.665 0.571
REB1
M08593_2.00 		Saccharomyces cerevisiae
RTTACCCGSMHDD
HHDKSCGGGTAAY		 Misc
DeBoer et al.(2011)
YBR049C_907 		0.665 0.571
REB1
M11062_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$REB1_B 		0.665 0.571
REB1
M11063_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$REB1_Q5 		0.665 0.571
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDK46716 Myb 259 303
EDK46716 Myb 311 329
EDK46716 Myb 368 404

Links

Other Myb/SANT family TFs
Other Lodderomyces elongisporus TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
KAFR_0E01200 Kazachstania africana KAFR_0E01200 I 0.709
NCAS_0A10470 Naumovozyma castellii NCAS_0A10470 I 0.705
Scas_Contig661.16 Saccharomyces castellii Scas_Contig661.16 I 0.705
Ecym_5138 Eremothecium cymbalariae Ecym_5138 I 0.703
AGOS_ABL092W Ashbya gossypii AGOS_ABL092W I 0.693
AACERI_AaceriABL092W Saccharomycetaceae sp ashbya aceri AACERI_AaceriABL092W I 0.673
SKUD_123301 Saccharomyces kudriavzevii SKUD_123301 I 0.665
REB1 Saccharomyces cerevisiae YBR049C D 0.665
1177_YBR049C Saccharomyces paradoxus 1177_YBR049C I 0.665
TDEL_0D03690 Torulaspora delbrueckii TDEL_0D03690 I 0.661