ONIVA04G19090 (Oryza nivara)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ONIVA04G19090 T003594_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF034
M06614_2.00 		Arabidopsis thaliana
NHNYCACCGACANHD
HDNTGTCGGTGRNDN		 Dap-seq
OMalley et al.(2016)
At2g44940_col_a 		0.786 0.940
ERF034
M06615_2.00 		Arabidopsis thaliana
NDBCACCGACANH
DNTGTCGGTGVHN		 Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a 		0.786 0.940
ERF035
M06631_2.00 		Arabidopsis thaliana
YCACCGACANWDNH
DNHWNTGTCGGTGR		 Dap-seq
OMalley et al.(2016)
AT3G60490_col_a 		0.771 0.900
ERF035
M06632_2.00 		Arabidopsis thaliana
NNBCACCGACAHWNNN
NNNWDTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a 		0.771 0.900
Q8LKX0_MAIZE
M09722_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DBF2_01 		0.758 0.940
ERF043
M01627_2.00 		Arabidopsis thaliana
YRCCGACA
TGTCGGYR		 PBM
Weirauch et al.(2014)
pTH7413 		0.758 0.880
ERF043
M06651_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNN
NNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a 		0.758 0.880
ERF043
M06652_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNH
DNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_col 		0.758 0.880
Q5MAR7_BRANA
M09742_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII1_01 		0.745 0.920
Q3HS44_BRANA
M09741_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII2_01 		0.745 0.920
Q3HS43_BRANA
M09740_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII3_01 		0.745 0.920
AT3G16280
M06618_2.00 		Arabidopsis thaliana
NDNCACCGACANHN
NDNTGTCGGTGNHN		 Dap-seq
OMalley et al.(2016)
AT3G16280_col_a 		0.735 0.860
AT3G16280
M06619_2.00 		Arabidopsis thaliana
BCACCGACAHWNNN
NNNWDTGTCGGTGV		 Dap-seq
OMalley et al.(2016)
AT3G16280_colamp_a 		0.735 0.860
ERF039
M01620_2.00 		Arabidopsis thaliana
NNRCCGACDN
NHGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH8101 		0.729 0.900
ERF039
M06635_2.00 		Arabidopsis thaliana
HNNHDYCRCCGMCRN
NYGKCGGYGRHDNND		 Dap-seq
OMalley et al.(2016)
At4g16750_col_a 		0.729 0.900
ERF039
M06636_2.00 		Arabidopsis thaliana
NNNNNNYCACCGACAHH
DDTGTCGGTGRNNNNNN		 Dap-seq
OMalley et al.(2016)
At4g16750_colamp_a 		0.729 0.900
ERF038
M06608_2.00 		Arabidopsis thaliana
NHNHHDYCRCCGACA
TGTCGGYGRHDDNDN		 Dap-seq
OMalley et al.(2016)
ERF38_col_a 		0.729 0.880
ERF037
M00843_2.00 		Arabidopsis thaliana
NRCCGACRN
NYGTCGGYN		 PBM
Franco-Zorrilla et al.(2014)
At1g77200 		0.718 0.880
ERF037
M06599_2.00 		Arabidopsis thaliana
YCRCCGACAHHNNH
DNNDDTGTCGGYGR		 Dap-seq
OMalley et al.(2016)
AT1G77200_col_a 		0.718 0.880
ERF037
M06600_2.00 		Arabidopsis thaliana
NNYACCGACAHN
NDTGTCGGTRNN		 Dap-seq
OMalley et al.(2016)
AT1G77200_colamp_a 		0.718 0.880
Q3HS42_BRANA
M09739_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII4_01 		0.702 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA04G19090.1 AP2 45 96

Links

Other AP2 family TFs
Other Oryza nivara TFs

446 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28644.m000915 Ricinus communis 28644.m000915 I
29739.m003586 Ricinus communis 29739.m003586 I
29771.m000072 Ricinus communis 29771.m000072 I
Al_scaffold_0008_672 Arabidopsis lyrata Al_scaffold_0008_672 I
AMTR_s00078p00145410 Amborella trichopoda AMTR_s00078p00145410 I
Aquca_014_00461 Aquilegia coerulea Aquca_014_00461 I
WRKY50 Arabidopsis thaliana AT5G26170 D
WRKY49 Arabidopsis thaliana AT5G43290 I
WRKY51 Arabidopsis thaliana AT5G64810 D
BGIOSGA000921 Oryza indica BGIOSGA000921 I
BGIOSGA002237 Oryza indica BGIOSGA002237 I
BGIOSGA003851 Oryza indica BGIOSGA003851 I
BGIOSGA018676 Oryza indica BGIOSGA018676 I
BGIOSGA020266 Oryza indica BGIOSGA020266 I
Bo2g155960 Brassica oleracea Bo2g155960 I
Bo2g166420 Brassica oleracea Bo2g166420 I
Bo3g100860 Brassica oleracea Bo3g100860 I
Bo7g095430 Brassica oleracea Bo7g095430 I
Bo9g011080 Brassica oleracea Bo9g011080 I
Bo9g018440 Brassica oleracea Bo9g018440 I
Bostr.0568s0314 Boechera stricta Bostr.0568s0314 I
Bostr.29827s0201 Boechera stricta Bostr.29827s0201 I
Bostr.3148s0146 Boechera stricta Bostr.3148s0146 I
Bra009885 Brassica rapa Bra009885 I
Bra020546 Brassica rapa Bra020546 I
Bra024328 Brassica rapa Bra024328 I
Bra031900 Brassica rapa Bra031900 I
Bra037796 Brassica rapa Bra037796 I
BRADI2G05510 Brachypodium distachyon BRADI2G05510 I
BRADI2G18530 Brachypodium distachyon BRADI2G18530 I
BRADI2G33540 Brachypodium distachyon BRADI2G33540 I
BRADI2G48090 Brachypodium distachyon BRADI2G48090 I
Cagra.0998s0013 Capsella grandiflora Cagra.0998s0013 I
Cagra.2438s0022 Capsella grandiflora Cagra.2438s0022 I
Cagra.9063s0001 Capsella grandiflora Cagra.9063s0001 I
Carubv10002099m.g Capsella rubella Carubv10002099m.g I
Carubv10026841m.g Capsella rubella Carubv10026841m.g I
Carubv10027178m.g Capsella rubella Carubv10027178m.g I
cassava10657.m1 Manihot esculenta cassava10657.m1 I
cassava14062.valid.m1 Manihot esculenta cassava14062.valid.m1 I
cassava14063.valid.m1 Manihot esculenta cassava14063.valid.m1 I
cassava28704.m1 Manihot esculenta cassava28704.m1 I
Ca_03825 Cicer arietinum Ca_03825 I
Ca_04141 Cicer arietinum Ca_04141 I
Ca_09134 Cicer arietinum Ca_09134 I
chr1.CM0032.340.nd Lotus japonicus chr1.CM0032.340.nd I
chr1.CM0147.890.nc Lotus japonicus chr1.CM0147.890.nc I
chr4.CM0333.60.nd Lotus japonicus chr4.CM0333.60.nd I
Ciclev10005203m.g Citrus clementina Ciclev10005203m.g I
Ciclev10009761m.g Citrus clementina Ciclev10009761m.g I
Ciclev10013616m.g Citrus clementina Ciclev10013616m.g I
Ciclev10026733m.g Citrus clementina Ciclev10026733m.g I
Cla018477 Citrullus lanatus Cla018477 I
Cla022318 Citrullus lanatus Cla022318 I
Cucsa.066300 Cucumis sativus Cucsa.066300 I
Cucsa.101530 Cucumis sativus Cucsa.101530 I
Cucsa.250350 Cucumis sativus Cucsa.250350 I
Eucgr.C00675 Eucalyptus grandis Eucgr.C00675 I
Eucgr.I00316 Eucalyptus grandis Eucgr.I00316 I
Eucgr.I00317 Eucalyptus grandis Eucgr.I00317 I
evm.TU.supercontig_126.49 Carica papaya evm.TU.supercontig_126.49 I
evm.TU.supercontig_919.2 Carica papaya evm.TU.supercontig_919.2 I
e_gw1.159.68.1 Physcomitrella patens e_gw1.159.68.1 I
F775_19446 Aegilops tauschii F775_19446 I
F775_27801 Aegilops tauschii F775_27801 I
F775_44085 Aegilops tauschii F775_44085 I
F775_52480 Aegilops tauschii F775_52480 I
WRKY50 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6002222 I
WRKY51 Arabidopsis lyrata fgenesh2_kg.8__2513__AT5G64810.1 I
fgenesh2_kg.97__1__AT5G43290.1 Arabidopsis lyrata fgenesh2_kg.97__1__AT5G43290.1 I
gene15421-v1.0-hybrid Fragaria vesca gene15421-v1.0-hybrid I
gene18438-v1.0-hybrid Fragaria vesca gene18438-v1.0-hybrid I
gene22024-v1.0-hybrid Fragaria vesca gene22024-v1.0-hybrid I
GLYMA04G05700 Glycine max GLYMA04G05700 I
GLYMA04G39650 Glycine max GLYMA04G39650 I
GLYMA05G31800 Glycine max GLYMA05G31800 I
GLYMA06G05721 Glycine max GLYMA06G05721 I
GLYMA06G15220 Glycine max GLYMA06G15220 I
GLYMA07G16040 Glycine max GLYMA07G16040 I
GLYMA08G15050 Glycine max GLYMA08G15050 I
GLYMA14G11440 Glycine max GLYMA14G11440 I
GLYMA17G34210 Glycine max GLYMA17G34210 I
GLYMA18G39970 Glycine max GLYMA18G39970 I
Gorai.001G021500 Gossypium raimondii Gorai.001G021500 I
Gorai.003G047800 Gossypium raimondii Gorai.003G047800 I
Gorai.006G265200 Gossypium raimondii Gorai.006G265200 I
Gorai.007G245200 Gossypium raimondii Gorai.007G245200 I
Gorai.009G259600 Gossypium raimondii Gorai.009G259600 I
Gorai.010G098000 Gossypium raimondii Gorai.010G098000 I
Gorai.010G131300 Gossypium raimondii Gorai.010G131300 I
Gorai.011G114200 Gossypium raimondii Gorai.011G114200 I
GRMZM2G057116 Zea mays GRMZM2G057116 I
GRMZM2G101405 Zea mays GRMZM2G101405 I
GRMZM2G137802 Zea mays GRMZM2G137802 I
GRMZM2G163054 Zea mays GRMZM2G163054 I
GRMZM2G475984 Zea mays GRMZM2G475984 I
GRMZM2G516301 Zea mays GRMZM2G516301 I
GRMZM5G863420 Zea mays GRMZM5G863420 I
GSMUA_Achr10G00810_001 Musa acuminata GSMUA_Achr10G00810_001 I
GSMUA_Achr3G20450_001 Musa acuminata GSMUA_Achr3G20450_001 I
GSMUA_Achr7G09680_001 Musa acuminata GSMUA_Achr7G09680_001 I
GSMUA_Achr7G15060_001 Musa acuminata GSMUA_Achr7G15060_001 I
GSMUA_Achr7G23980_001 Musa acuminata GSMUA_Achr7G23980_001 I
GSMUA_Achr8G02180_001 Musa acuminata GSMUA_Achr8G02180_001 I
GSMUA_Achr8G26240_001 Musa acuminata GSMUA_Achr8G26240_001 I
GSMUA_AchrUn_randomG18710_001 Musa acuminata GSMUA_AchrUn_randomG18710_001 I
LjSGA_012799.2 Lotus japonicus LjSGA_012799.2 I
LPERR01G05270 Leersia perrieri LPERR01G05270 I
LPERR01G17790 Leersia perrieri LPERR01G17790 I
LPERR01G24650 Leersia perrieri LPERR01G24650 I
LPERR05G04920 Leersia perrieri LPERR05G04920 I
LPERR05G19900 Leersia perrieri LPERR05G19900 I
Lus10006848.g Linum usitatissimum Lus10006848.g I
Lus10035841.g Linum usitatissimum Lus10035841.g I
Lus10036624.g Linum usitatissimum Lus10036624.g I
MDP0000121669 Malus domestica MDP0000121669 I
MDP0000253189 Malus domestica MDP0000253189 I
MDP0000299555 Malus domestica MDP0000299555 I
MDP0000480547 Malus domestica MDP0000480547 I
mgf023486m Mimulus guttatus mgf023486m I
mgf026356m Mimulus guttatus mgf026356m I
MLOC_10264 Hordeum vulgare MLOC_10264 I
MLOC_12079 Hordeum vulgare MLOC_12079 I
MLOC_81131 Hordeum vulgare MLOC_81131 I
MTR_1g015140 Medicago truncatula MTR_1g015140 I
MTR_3g095040 Medicago truncatula MTR_3g095040 I
MTR_3g104750 Medicago truncatula MTR_3g104750 I
MTR_7g062220 Medicago truncatula MTR_7g062220 I
MTR_8g092010 Medicago truncatula MTR_8g092010 I
OB01G37710 Oryza brachyantha OB01G37710 I
OB05G15280 Oryza brachyantha OB05G15280 I
OB05G31630 Oryza brachyantha OB05G31630 I
OBART01G20830 Oryza barthii OBART01G20830 I
OBART01G28750 Oryza barthii OBART01G28750 I
OBART01G28780 Oryza barthii OBART01G28780 I
OBART05G05560 Oryza barthii OBART05G05560 I
OBART05G24090 Oryza barthii OBART05G24090 I
OGLUM01G06090 Oryza glumaepatula OGLUM01G06090 I
OGLUM01G24490 Oryza glumaepatula OGLUM01G24490 I
OGLUM01G32750 Oryza glumaepatula OGLUM01G32750 I
OGLUM05G05440 Oryza glumaepatula OGLUM05G05440 I
OLONG_016272 Oryza longistaminata OLONG_016272 I
OMERI01G05840 Oryza meridionalis OMERI01G05840 I
OMERI01G18980 Oryza meridionalis OMERI01G18980 I
OMERI01G26280 Oryza meridionalis OMERI01G26280 I
OMERI01G26720 Oryza meridionalis OMERI01G26720 I
OMERI05G05240 Oryza meridionalis OMERI05G05240 I
ONIVA01G06360 Oryza nivara ONIVA01G06360 I
ONIVA01G23410 Oryza nivara ONIVA01G23410 I
ONIVA05G06030 Oryza nivara ONIVA05G06030 I
ONIVA05G24830 Oryza nivara ONIVA05G24830 I
OPUNC01G05450 Oryza punctata OPUNC01G05450 I
OPUNC01G20950 Oryza punctata OPUNC01G20950 I
OPUNC01G28510 Oryza punctata OPUNC01G28510 I
OPUNC05G05190 Oryza punctata OPUNC05G05190 I
OPUNC05G21470 Oryza punctata OPUNC05G21470 I
orange1.1g017479m.g Citrus sinensis orange1.1g017479m.g I
orange1.1g029257m.g Citrus sinensis orange1.1g029257m.g I
orange1.1g031482m.g Citrus sinensis orange1.1g031482m.g I
ORGLA01G0052400 Oryza glaberrima ORGLA01G0052400 I
ORGLA01G0238400 Oryza glaberrima ORGLA01G0238400 I
ORGLA05G0050000 Oryza glaberrima ORGLA05G0050000 I
ORUFI01G06050 Oryza rufipogon ORUFI01G06050 I
ORUFI01G23500 Oryza rufipogon ORUFI01G23500 I
ORUFI01G31840 Oryza rufipogon ORUFI01G31840 I
ORUFI05G05890 Oryza rufipogon ORUFI05G05890 I
ORUFI05G25660 Oryza rufipogon ORUFI05G25660 I
OS01G0186000 Oryza sativa OS01G0186000 I
OS01G0584900 Oryza sativa OS01G0584900 I
OS01G0714800 Oryza sativa OS01G0714800 I
OS05G0183100 Oryza sativa OS05G0183100 I
OS05G0537100 Oryza sativa OS05G0537100 I
Pavir.Ca01028 Panicum virgatum Pavir.Ca01028 I
Pavir.Ca01747 Panicum virgatum Pavir.Ca01747 I
Pavir.Ea00274 Panicum virgatum Pavir.Ea00274 I
Pavir.Ea02041 Panicum virgatum Pavir.Ea02041 I
Pavir.Ea02619 Panicum virgatum Pavir.Ea02619 I
Pavir.Eb02454 Panicum virgatum Pavir.Eb02454 I
Pavir.Eb02766 Panicum virgatum Pavir.Eb02766 I
Pavir.J03284 Panicum virgatum Pavir.J03284 I
Pavir.J05732 Panicum virgatum Pavir.J05732 I
Pavir.J08526 Panicum virgatum Pavir.J08526 I
PDK_20s1331611g001 Phoenix dactylifera PDK_20s1331611g001 I
PDK_20s1384091g002 Phoenix dactylifera PDK_20s1384091g002 I
PDK_20s1512971g002 Phoenix dactylifera PDK_20s1512971g002 I
PGSC0003DMG400033177 Solanum tuberosum PGSC0003DMG400033177 I
PGSC0003DMG401031196 Solanum tuberosum PGSC0003DMG401031196 I
PK25870.1 Cannabis sativa PK25870.1 D
PK29640.1 Cannabis sativa PK29640.1 I
Pm001825 Prunus mume Pm001825 I
Pm002679 Prunus mume Pm002679 I
Pm005548 Prunus mume Pm005548 I
POPTR_0005s08720 Populus trichocarpa POPTR_0005s08720 I
POPTR_0006s24050 Populus trichocarpa POPTR_0006s24050 I
POPTR_0007s06720 Populus trichocarpa POPTR_0007s06720 I
POPTR_0010s15750 Populus trichocarpa POPTR_0010s15750 I
PRUPE_ppa015480mg Prunus persica PRUPE_ppa015480mg I
PRUPE_ppa019550mg Prunus persica PRUPE_ppa019550mg I
SapurV1A.0318s0110 Salix purpurea SapurV1A.0318s0110 I
SapurV1A.0594s0120 Salix purpurea SapurV1A.0594s0120 I
SapurV1A.1151s0090 Salix purpurea SapurV1A.1151s0090 I
Sb03g003360 Sorghum bicolor Sb03g003360 I
Sb03g026170 Sorghum bicolor Sb03g026170 I
Sb03g032800 Sorghum bicolor Sb03g032800 I
Sb09g005700 Sorghum bicolor Sb09g005700 I
Sb09g026830 Sorghum bicolor Sb09g026830 I
scaffold_800733.1 Arabidopsis lyrata scaffold_800733.1 I
scaffold_9700001.1 Arabidopsis lyrata scaffold_9700001.1 I
Si002621m.g Setaria italica Si002621m.g I
Si002862m.g Setaria italica Si002862m.g I
Si004464m.g Setaria italica Si004464m.g I
Si023194m.g Setaria italica Si023194m.g I
Si023279m.g Setaria italica Si023279m.g I
Solyc04g051690.2 Solanum lycopersicum Solyc04g051690.2 I
Solyc04g072070.2 Solanum lycopersicum Solyc04g072070.2 I
Solyc08g062490.2 Solanum lycopersicum Solyc08g062490.2 I
TCM_001265 Theobroma cacao TCM_001265 I
TCM_021911 Theobroma cacao TCM_021911 I
TCM_035897 Theobroma cacao TCM_035897 I
TCM_037343 Theobroma cacao TCM_037343 I
Thhalv10003250m.g Eutrema salsugineum Thhalv10003250m.g I
Thhalv10004930m.g Eutrema salsugineum Thhalv10004930m.g I
Thhalv10005029m.g Eutrema salsugineum Thhalv10005029m.g I
TRAES3BF066700160CFD_g Triticum aestivum TRAES3BF066700160CFD_g I
TRAES3BF111700140CFD_g Triticum aestivum TRAES3BF111700140CFD_g I
TRAES3BF267200010CFD_g Triticum aestivum TRAES3BF267200010CFD_g I
Traes_1AL_9ADA7A031 Triticum aestivum Traes_1AL_9ADA7A031 I
Traes_1AS_1432A2F79 Triticum aestivum Traes_1AS_1432A2F79 I
Traes_1DL_D550418641 Triticum aestivum Traes_1DL_D550418641 I
Traes_3DL_DF0D3F3FE Triticum aestivum Traes_3DL_DF0D3F3FE I
Traes_4AL_C2A825B6D Triticum aestivum Traes_4AL_C2A825B6D I
TRIUR3_01979 Triticum urartu TRIUR3_01979 I
TRIUR3_24021 Triticum urartu TRIUR3_24021 I
TRIUR3_29978 Triticum urartu TRIUR3_29978 I
TRIUR3_33662 Triticum urartu TRIUR3_33662 I
VIT_04s0008g01470 Vitis vinifera VIT_04s0008g01470 I
VIT_04s0069g00970 Vitis vinifera VIT_04s0069g00970 I
VIT_04s0069g00980 Vitis vinifera VIT_04s0069g00980 I
VIT_07s0031g01710 Vitis vinifera VIT_07s0031g01710 I
WRKY49 Vitis vinifera VIT_08s0007g00570 I