Carubv10027178m.g (Capsella rubella)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Carubv10027178m.g T356005_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY51
M02568_2.00 		Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7478 		0.877 0.966
PK25870.1
M01325_2.00 		Cannabis sativa
NRGTCAAM
KTTGACYN		 PBM
Lambert et al.(2019)
pTH10156 		0.862 0.862
WRKY50
M07424_2.00 		Arabidopsis thaliana
NNAAAAGTCAAMN
NKTTGACTTTTNN		 Dap-seq
OMalley et al.(2016)
WRKY50_col_a 		0.823 0.724
WRKY50
M07425_2.00 		Arabidopsis thaliana
NWAAGTCAANN
NNTTGACTTWN		 Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a 		0.823 0.724
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10027178m WRKY 110 167

Links

Other WRKY family TFs
Other Capsella rubella TFs

248 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.2438s0022 Capsella grandiflora Cagra.2438s0022 I 0.880
WRKY51 Arabidopsis thaliana AT5G64810 D 0.877
WRKY51 Arabidopsis lyrata fgenesh2_kg.8__2513__AT5G64810.1 I 0.877
Bo9g018440 Brassica oleracea Bo9g018440 I 0.875
Bra037796 Brassica rapa Bra037796 I 0.874
Thhalv10004930m.g Eutrema salsugineum Thhalv10004930m.g I 0.873
Bo3g100860 Brassica oleracea Bo3g100860 I 0.872
Bostr.0568s0314 Boechera stricta Bostr.0568s0314 I 0.871
Bra024328 Brassica rapa Bra024328 I 0.870
Bo2g166420 Brassica oleracea Bo2g166420 I 0.869
Bra031900 Brassica rapa Bra031900 I 0.869
PRUPE_ppa015480mg Prunus persica PRUPE_ppa015480mg I 0.862
PK25870.1 Cannabis sativa PK25870.1 D 0.862
SapurV1A.0594s0120 Salix purpurea SapurV1A.0594s0120 I 0.861
POPTR_0007s06720 Populus trichocarpa POPTR_0007s06720 I 0.860
GLYMA05G31800 Glycine max GLYMA05G31800 I 0.859
VIT_07s0031g01710 Vitis vinifera VIT_07s0031g01710 I 0.859
chr1.CM0032.340.nd Lotus japonicus chr1.CM0032.340.nd I 0.859
POPTR_0005s08720 Populus trichocarpa POPTR_0005s08720 I 0.858
cassava14062.valid.m1 Manihot esculenta cassava14062.valid.m1 I 0.858
cassava14063.valid.m1 Manihot esculenta cassava14063.valid.m1 I 0.858
Eucgr.I00316 Eucalyptus grandis Eucgr.I00316 I 0.858
MDP0000253189 Malus domestica MDP0000253189 I 0.857
MTR_8g092010 Medicago truncatula MTR_8g092010 I 0.856
Cucsa.250350 Cucumis sativus Cucsa.250350 I 0.855
Eucgr.I00317 Eucalyptus grandis Eucgr.I00317 I 0.855
Gorai.007G245200 Gossypium raimondii Gorai.007G245200 I 0.855
Solyc04g051690.2 Solanum lycopersicum Solyc04g051690.2 I 0.854
TCM_001265 Theobroma cacao TCM_001265 I 0.854
GLYMA04G39650 Glycine max GLYMA04G39650 I 0.853
Pm001825 Prunus mume Pm001825 I 0.852
Gorai.003G047800 Gossypium raimondii Gorai.003G047800 I 0.852
GLYMA08G15050 Glycine max GLYMA08G15050 I 0.851
Ca_04141 Cicer arietinum Ca_04141 I 0.851
Cucsa.101530 Cucumis sativus Cucsa.101530 I 0.851
Ciclev10026733m.g Citrus clementina Ciclev10026733m.g I 0.851
orange1.1g029257m.g Citrus sinensis orange1.1g029257m.g I 0.851
Aquca_014_00461 Aquilegia coerulea Aquca_014_00461 I 0.848
SapurV1A.0318s0110 Salix purpurea SapurV1A.0318s0110 I 0.848
GRMZM2G057116 Zea mays GRMZM2G057116 I 0.847
GSMUA_Achr3G20450_001 Musa acuminata GSMUA_Achr3G20450_001 I 0.847
LPERR05G04920 Leersia perrieri LPERR05G04920 I 0.847
Sb09g005700 Sorghum bicolor Sb09g005700 I 0.847
Si023279m.g Setaria italica Si023279m.g I 0.847
TRAES3BF111700140CFD_g Triticum aestivum TRAES3BF111700140CFD_g I 0.847
Traes_3DL_DF0D3F3FE Triticum aestivum Traes_3DL_DF0D3F3FE I 0.847
TRIUR3_33662 Triticum urartu TRIUR3_33662 I 0.847
29771.m000072 Ricinus communis 29771.m000072 I 0.847
Pavir.Ca01028 Panicum virgatum Pavir.Ca01028 I 0.847
Pavir.J05732 Panicum virgatum Pavir.J05732 I 0.847
PDK_20s1512971g002 Phoenix dactylifera PDK_20s1512971g002 I 0.847
GSMUA_Achr7G09680_001 Musa acuminata GSMUA_Achr7G09680_001 I 0.846
BRADI2G48090 Brachypodium distachyon BRADI2G48090 I 0.845
LPERR01G24650 Leersia perrieri LPERR01G24650 I 0.845
Si004464m.g Setaria italica Si004464m.g I 0.845
evm.TU.supercontig_919.2 Carica papaya evm.TU.supercontig_919.2 I 0.845
Pavir.Ea02619 Panicum virgatum Pavir.Ea02619 I 0.845
BGIOSGA018676 Oryza indica BGIOSGA018676 I 0.844
GRMZM2G101405 Zea mays GRMZM2G101405 I 0.844
MLOC_12079 Hordeum vulgare MLOC_12079 I 0.844
OB05G15280 Oryza brachyantha OB05G15280 I 0.844
OBART05G05560 Oryza barthii OBART05G05560 I 0.844
OGLUM05G05440 Oryza glumaepatula OGLUM05G05440 I 0.844
OMERI05G05240 Oryza meridionalis OMERI05G05240 I 0.844
ONIVA05G06030 Oryza nivara ONIVA05G06030 I 0.844
OPUNC05G05190 Oryza punctata OPUNC05G05190 I 0.844
ORGLA05G0050000 Oryza glaberrima ORGLA05G0050000 I 0.844
ORUFI05G05890 Oryza rufipogon ORUFI05G05890 I 0.844
OS05G0183100 Oryza sativa OS05G0183100 I 0.844
Sb03g032800 Sorghum bicolor Sb03g032800 I 0.844
Traes_1AS_1432A2F79 Triticum aestivum Traes_1AS_1432A2F79 I 0.844
Traes_1DL_D550418641 Triticum aestivum Traes_1DL_D550418641 I 0.844
TRIUR3_29978 Triticum urartu TRIUR3_29978 I 0.844
BGIOSGA000921 Oryza indica BGIOSGA000921 I 0.843
GRMZM2G163054 Zea mays GRMZM2G163054 I 0.843
MLOC_10264 Hordeum vulgare MLOC_10264 I 0.843
MLOC_81131 Hordeum vulgare MLOC_81131 I 0.843
OBART01G28750 Oryza barthii OBART01G28750 I 0.843
OBART01G28780 Oryza barthii OBART01G28780 I 0.843
OGLUM01G32750 Oryza glumaepatula OGLUM01G32750 I 0.843
OMERI01G26280 Oryza meridionalis OMERI01G26280 I 0.843
OPUNC01G28510 Oryza punctata OPUNC01G28510 I 0.843
ORGLA01G0238400 Oryza glaberrima ORGLA01G0238400 I 0.843
ORUFI01G31840 Oryza rufipogon ORUFI01G31840 I 0.843
OS01G0714800 Oryza sativa OS01G0714800 I 0.843
PGSC0003DMG401031196 Solanum tuberosum PGSC0003DMG401031196 I 0.843
Sb03g003360 Sorghum bicolor Sb03g003360 I 0.843
Lus10006848.g Linum usitatissimum Lus10006848.g I 0.843
Lus10035841.g Linum usitatissimum Lus10035841.g I 0.843
Lus10036624.g Linum usitatissimum Lus10036624.g I 0.843
PDK_20s1331611g001 Phoenix dactylifera PDK_20s1331611g001 I 0.843
F775_52480 Aegilops tauschii F775_52480 I 0.842
GRMZM5G863420 Zea mays GRMZM5G863420 I 0.842
TRIUR3_01979 Triticum urartu TRIUR3_01979 I 0.842
BRADI2G33540 Brachypodium distachyon BRADI2G33540 I 0.841
GRMZM2G137802 Zea mays GRMZM2G137802 I 0.841
Pavir.Eb02766 Panicum virgatum Pavir.Eb02766 I 0.841
AMTR_s00078p00145410 Amborella trichopoda AMTR_s00078p00145410 I 0.840
BGIOSGA002237 Oryza indica BGIOSGA002237 I 0.840
BGIOSGA020266 Oryza indica BGIOSGA020266 I 0.840
BRADI2G18530 Brachypodium distachyon BRADI2G18530 I 0.840
F775_19446 Aegilops tauschii F775_19446 I 0.840
GRMZM2G475984 Zea mays GRMZM2G475984 I 0.840
GRMZM2G516301 Zea mays GRMZM2G516301 I 0.840
LPERR05G19900 Leersia perrieri LPERR05G19900 I 0.840
OB05G31630 Oryza brachyantha OB05G31630 I 0.840
OBART05G24090 Oryza barthii OBART05G24090 I 0.840
OGLUM01G06090 Oryza glumaepatula OGLUM01G06090 I 0.840
OMERI01G05840 Oryza meridionalis OMERI01G05840 I 0.840
OMERI01G26720 Oryza meridionalis OMERI01G26720 I 0.840
ONIVA01G06360 Oryza nivara ONIVA01G06360 I 0.840
ONIVA05G24830 Oryza nivara ONIVA05G24830 I 0.840
OPUNC01G05450 Oryza punctata OPUNC01G05450 I 0.840
OPUNC05G21470 Oryza punctata OPUNC05G21470 I 0.840
ORGLA01G0052400 Oryza glaberrima ORGLA01G0052400 I 0.840
ORUFI01G06050 Oryza rufipogon ORUFI01G06050 I 0.840
ORUFI05G25660 Oryza rufipogon ORUFI05G25660 I 0.840
OS01G0186000 Oryza sativa OS01G0186000 I 0.840
OS05G0537100 Oryza sativa OS05G0537100 I 0.840
Sb09g026830 Sorghum bicolor Sb09g026830 I 0.840
Si002621m.g Setaria italica Si002621m.g I 0.840
Si023194m.g Setaria italica Si023194m.g I 0.840
TCM_035897 Theobroma cacao TCM_035897 I 0.840
Cla022318 Citrullus lanatus Cla022318 I 0.840
Pavir.Ca01747 Panicum virgatum Pavir.Ca01747 I 0.840
Pavir.Ea00274 Panicum virgatum Pavir.Ea00274 I 0.840
Pavir.J03284 Panicum virgatum Pavir.J03284 I 0.840
Pavir.J08526 Panicum virgatum Pavir.J08526 I 0.840
SapurV1A.1151s0090 Salix purpurea SapurV1A.1151s0090 I 0.840
GLYMA06G15220 Glycine max GLYMA06G15220 I 0.839
MTR_3g095040 Medicago truncatula MTR_3g095040 I 0.839
VIT_04s0008g01470 Vitis vinifera VIT_04s0008g01470 I 0.839
TRAES3BF267200010CFD_g Triticum aestivum TRAES3BF267200010CFD_g I 0.838
BRADI2G05510 Brachypodium distachyon BRADI2G05510 I 0.837
F775_27801 Aegilops tauschii F775_27801 I 0.837
LPERR01G05270 Leersia perrieri LPERR01G05270 I 0.837
PK29640.1 Cannabis sativa PK29640.1 I 0.837
PDK_20s1384091g002 Phoenix dactylifera PDK_20s1384091g002 I 0.837
GLYMA04G05700 Glycine max GLYMA04G05700 I 0.836
Solyc04g072070.2 Solanum lycopersicum Solyc04g072070.2 I 0.836
Solyc08g062490.2 Solanum lycopersicum Solyc08g062490.2 I 0.836
Traes_1AL_9ADA7A031 Triticum aestivum Traes_1AL_9ADA7A031 I 0.836
TRAES3BF066700160CFD_g Triticum aestivum TRAES3BF066700160CFD_g I 0.836
Pm005548 Prunus mume Pm005548 I 0.836
Eucgr.C00675 Eucalyptus grandis Eucgr.C00675 I 0.836
cassava28704.m1 Manihot esculenta cassava28704.m1 I 0.835
mgf026356m Mimulus guttatus mgf026356m I 0.835
Gorai.010G131300 Gossypium raimondii Gorai.010G131300 I 0.835
POPTR_0006s24050 Populus trichocarpa POPTR_0006s24050 I 0.834
Sb03g026170 Sorghum bicolor Sb03g026170 I 0.834
TCM_037343 Theobroma cacao TCM_037343 I 0.834
VIT_04s0069g00980 Vitis vinifera VIT_04s0069g00980 I 0.834
Gorai.001G021500 Gossypium raimondii Gorai.001G021500 I 0.834
MDP0000480547 Malus domestica MDP0000480547 I 0.834
Bo9g011080 Brassica oleracea Bo9g011080 I 0.833
Bra009885 Brassica rapa Bra009885 I 0.833
F775_44085 Aegilops tauschii F775_44085 I 0.833
MTR_3g104750 Medicago truncatula MTR_3g104750 I 0.833
VIT_04s0069g00970 Vitis vinifera VIT_04s0069g00970 I 0.833
29739.m003586 Ricinus communis 29739.m003586 I 0.833
gene22024-v1.0-hybrid Fragaria vesca gene22024-v1.0-hybrid I 0.833
Ciclev10009761m.g Citrus clementina Ciclev10009761m.g I 0.832
orange1.1g031482m.g Citrus sinensis orange1.1g031482m.g I 0.832
cassava10657.m1 Manihot esculenta cassava10657.m1 I 0.831
LjSGA_012799.2 Lotus japonicus LjSGA_012799.2 I 0.831
MTR_1g015140 Medicago truncatula MTR_1g015140 I 0.830
PGSC0003DMG400031140 Solanum tuberosum PGSC0003DMG400031140 I 0.830
evm.TU.supercontig_126.49 Carica papaya evm.TU.supercontig_126.49 I 0.830
Gorai.011G114200 Gossypium raimondii Gorai.011G114200 I 0.830
BGIOSGA003851 Oryza indica BGIOSGA003851 I 0.829
LPERR01G17790 Leersia perrieri LPERR01G17790 I 0.829
OB01G37710 Oryza brachyantha OB01G37710 I 0.829
OBART01G20830 Oryza barthii OBART01G20830 I 0.829
OGLUM01G24490 Oryza glumaepatula OGLUM01G24490 I 0.829
OLONG_016272 Oryza longistaminata OLONG_016272 I 0.829
OMERI01G18980 Oryza meridionalis OMERI01G18980 I 0.829
ONIVA01G23410 Oryza nivara ONIVA01G23410 I 0.829
OPUNC01G20950 Oryza punctata OPUNC01G20950 I 0.829
ORUFI01G23500 Oryza rufipogon ORUFI01G23500 I 0.829
OS01G0584900 Oryza sativa OS01G0584900 I 0.829
PGSC0003DMG400033177 Solanum tuberosum PGSC0003DMG400033177 I 0.829
Cagra.0998s0013 Capsella grandiflora Cagra.0998s0013 I 0.829
Carubv10002099m.g Capsella rubella Carubv10002099m.g I 0.829
Bo7g095430 Brassica oleracea Bo7g095430 I 0.828
28644.m000915 Ricinus communis 28644.m000915 I 0.828
Bostr.29827s0201 Boechera stricta Bostr.29827s0201 I 0.828
Gorai.010G098000 Gossypium raimondii Gorai.010G098000 I 0.828
GLYMA06G05721 Glycine max GLYMA06G05721 I 0.827
PGSC0003DMG400023196 Solanum tuberosum PGSC0003DMG400023196 I 0.827
Si002862m.g Setaria italica Si002862m.g I 0.826
Solyc12g056750.1 Solanum lycopersicum Solyc12g056750.1 I 0.826
MDP0000121669 Malus domestica MDP0000121669 I 0.826
PDK_20s1746561g001 Phoenix dactylifera PDK_20s1746561g001 I 0.826
GSMUA_Achr8G26240_001 Musa acuminata GSMUA_Achr8G26240_001 I 0.825
Gorai.009G259600 Gossypium raimondii Gorai.009G259600 I 0.825
Bo2g155960 Brassica oleracea Bo2g155960 I 0.824
Bra020546 Brassica rapa Bra020546 I 0.824
Pavir.Eb02454 Panicum virgatum Pavir.Eb02454 I 0.824
Thhalv10005029m.g Eutrema salsugineum Thhalv10005029m.g I 0.824
WRKY50 Arabidopsis thaliana AT5G26170 D 0.823
Ca_09134 Cicer arietinum Ca_09134 I 0.823
Pavir.Ea02041 Panicum virgatum Pavir.Ea02041 I 0.823
GLYMA17G34210 Glycine max GLYMA17G34210 I 0.822
GSMUA_Achr7G23980_001 Musa acuminata GSMUA_Achr7G23980_001 I 0.821
chr4.CM0333.60.nd Lotus japonicus chr4.CM0333.60.nd I 0.821
TRIUR3_24021 Triticum urartu TRIUR3_24021 I 0.820
WRKY50 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6002222 I 0.817
chr1.CM0133.390.nc Lotus japonicus chr1.CM0133.390.nc I 0.815
OB01G30460 Oryza brachyantha OB01G30460 I 0.813
GLYMA14G11440 Glycine max GLYMA14G11440 I 0.812
e_gw1.159.68.1 Physcomitrella patens e_gw1.159.68.1 I 0.812
BGIOSGA000506 Oryza indica BGIOSGA000506 I 0.811
GLYMA08G01430 Glycine max GLYMA08G01430 I 0.811
GSMUA_Achr10G00810_001 Musa acuminata GSMUA_Achr10G00810_001 I 0.811
GSMUA_Achr7G15060_001 Musa acuminata GSMUA_Achr7G15060_001 I 0.811
GSMUA_AchrUn_randomG18710_001 Musa acuminata GSMUA_AchrUn_randomG18710_001 I 0.811
OB01G45670 Oryza brachyantha OB01G45670 I 0.811
OGLUM01G40860 Oryza glumaepatula OGLUM01G40860 I 0.811
OPUNC01G35780 Oryza punctata OPUNC01G35780 I 0.811
TCM_014419 Theobroma cacao TCM_014419 I 0.811
e_gw1.35.333.1 Physcomitrella patens e_gw1.35.333.1 I 0.811
gw1.198.128.1 Physcomitrella patens gw1.198.128.1 I 0.811
gene15421-v1.0-hybrid Fragaria vesca gene15421-v1.0-hybrid I 0.811
Bo6g051390 Brassica oleracea Bo6g051390 I 0.810
Bra037106 Brassica rapa Bra037106 I 0.810
LPERR01G31730 Leersia perrieri LPERR01G31730 I 0.810
mgf023486m Mimulus guttatus mgf023486m I 0.810
Eucgr.K03115 Eucalyptus grandis Eucgr.K03115 I 0.810
chr1.CM0147.890.nc Lotus japonicus chr1.CM0147.890.nc I 0.810
GLYMA07G16040 Glycine max GLYMA07G16040 I 0.809
GLYMA18G39970 Glycine max GLYMA18G39970 I 0.809
GSMUA_Achr8G02180_001 Musa acuminata GSMUA_Achr8G02180_001 I 0.809
PGSC0003DMG400007788 Solanum tuberosum PGSC0003DMG400007788 I 0.809
PRUPE_ppa019550mg Prunus persica PRUPE_ppa019550mg I 0.809
Sb03g039550 Sorghum bicolor Sb03g039550 I 0.809
Sb03g047350 Sorghum bicolor Sb03g047350 I 0.809
Si005025m.g Setaria italica Si005025m.g I 0.809
TCM_021911 Theobroma cacao TCM_021911 I 0.809
WRKY49 Vitis vinifera VIT_08s0007g00570 I 0.809
Cla018477 Citrullus lanatus Cla018477 I 0.809
Pm002679 Prunus mume Pm002679 I 0.809
Cucsa.066300 Cucumis sativus Cucsa.066300 I 0.809
mgf019359m Mimulus guttatus mgf019359m I 0.809
Ciclev10013616m.g Citrus clementina Ciclev10013616m.g I 0.809
gene18438-v1.0-hybrid Fragaria vesca gene18438-v1.0-hybrid I 0.809
GSMUA_Achr2G16390_001 Musa acuminata GSMUA_Achr2G16390_001 I 0.808
MTR_7g062220 Medicago truncatula MTR_7g062220 I 0.808
Gorai.012G104800 Gossypium raimondii Gorai.012G104800 I 0.808