CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb04g027940
(
Sorghum bicolor
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Sb04g027940
T005000_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb04g027940.1
AP2
178
238
SSFHGVTRHRWSGKYEAHLWDSSCRVEGRRRKGKQVYLGSYDTEEKAARAYDVAAIKYWGG
Sb04g027940.1
AP2
280
332
SIYRGVTRRQKDGRWQARIGLVAGTRDIYLGTFKTEEEAAEAYDIAAIEIRGK
Sb04g027940.2
AP2
178
238
SSFHGVTRHRWSGKYEAHLWDSSCRVEGRRRKGKQVYLGSYDTEEKAARAYDVAAIKYWGG
Sb04g027940.2
AP2
280
331
SIYRGVTRQKDGRWQARIGLVAGTRDIYLGTFKTEEEAAEAYDIAAIEIRGK
Links
Other
AP2
family TFs
Other
Sorghum bicolor
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_64047
Bipolaris maydis
COCC4DRAFT_64047
N
COCCADRAFT_24941
Bipolaris zeicola
COCCADRAFT_24941
N
COCSADRAFT_162023
Bipolaris sorokiniana
COCSADRAFT_162023
N
COCVIDRAFT_95073
Bipolaris victoriae
COCVIDRAFT_95073
N
fgenesh1_pg.C_scaffold_21000149
Cochliobolus heterostrophus C5
fgenesh1_pg.C_scaffold_21000149
N