Sb10g007780 (Sorghum bicolor)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Sb10g007780 T005073_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.802 0.900
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.802 0.900
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.799 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb10g007780.1 AP2 180 231

Links

Other AP2 family TFs
Other Sorghum bicolor TFs

426 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R000889 Calypte anna Aan_R000889 I
Aan_R008865 Calypte anna Aan_R008865 I
Afo_R001655 Aptenodytes forsteri Afo_R001655 I
Afo_R006147 Aptenodytes forsteri Afo_R006147 I
Alligator_sinensis_CCG007476.1 Alligator sinensis Alligator_sinensis_CCG007476.1 I
Brh_R002465 Buceros rhinoceros Brh_R002465 I
CapteG45287 Capitella teleta CapteG45287 I
CGI_10011355 Crassostrea gigas CGI_10011355 I
CGI_10017941 Crassostrea gigas CGI_10017941 I
Cmyd_10004881 Chelonia mydas Cmyd_10004881 I
Cmyd_10017172 Chelonia mydas Cmyd_10017172 I
GFI1 Anolis carolinensis ENSACAG00000004498 I
ENSAMEG00000013858 Ailuropoda melanoleuca ENSAMEG00000013858 I
ENSAMXG00000004835 Astyanax mexicanus ENSAMXG00000004835 I
ENSAPLG00000003373 Anas platyrhynchos ENSAPLG00000003373 I
ENSAPLG00000015700 Anas platyrhynchos ENSAPLG00000015700 I
GFI1B Bos taurus ENSBTAG00000012772 I
GFI1 Bos taurus ENSBTAG00000016723 I
ENSBTAP00000016974-D1 Bos grunniens ENSBTAP00000016974-D1 I
ENSBTAP00000022231-D1 Bos grunniens ENSBTAP00000022231-D1 I
GFI1B Canis familiaris ENSCAFG00000019877 I
GFI1 Canis familiaris ENSCAFG00000020155 I
GFI1 Callithrix jacchus ENSCJAG00000017609 I
GFI1B Callithrix jacchus ENSCJAG00000018071 I
GFI1 Cavia porcellus ENSCPOG00000011727 I
GFI1B Cavia porcellus ENSCPOG00000026928 I
ENSCSAG00000015008 Chlorocebus sabaeus ENSCSAG00000015008 I
gfi1aa Danio rerio ENSDARG00000020746 I
gfi1ab Danio rerio ENSDARG00000044457 I
gfi1b Danio rerio ENSDARG00000079947 I
GFI1 Dasypus novemcinctus ENSDNOG00000000782 I
GFI1B Dasypus novemcinctus ENSDNOG00000036528 I
Gfi1b Dipodomys ordii ENSDORG00000000342 I
GFI1 Equus caballus ENSECAG00000006647 I
GFI1B Equus caballus ENSECAG00000008127 I
GFI1 Erinaceus europaeus ENSEEUG00000000198 I
ENSFALG00000001479 Ficedula albicollis ENSFALG00000001479 I
GFI1 Felis catus ENSFCAG00000005914 I
GFI1B Felis catus ENSFCAG00000027147 I
GFI1 Homo sapiens ENSG00000162676 D
GFI1B Homo sapiens ENSG00000165702 D
gfi1ab Gasterosteus aculeatus ENSGACG00000004257 I
gfi1aa Gasterosteus aculeatus ENSGACG00000015674 I
gfi1b Gasterosteus aculeatus ENSGACG00000018134 I
GFI1B Gallus gallus ENSGALG00000003478 I
ENSGALG00000005940 Gallus gallus ENSGALG00000005940 I
GFI1 Gorilla gorilla ENSGGOG00000005320 I
GFI1B Gorilla gorilla ENSGGOG00000015828 I
ENSGMOG00000007737 Gadus morhua ENSGMOG00000007737 I
ENSGMOG00000017295 Gadus morhua ENSGMOG00000017295 I
ENSGMOG00000019123 Gadus morhua ENSGMOG00000019123 I
ENSLACG00000012207 Latimeria chalumnae ENSLACG00000012207 I
ENSLACG00000013362 Latimeria chalumnae ENSLACG00000013362 I
GFI1 Loxodonta africana ENSLAFG00000018346 I
GFI1B Loxodonta africana ENSLAFG00000022367 I
ENSLOCG00000004711 Lepisosteus oculatus ENSLOCG00000004711 I
ENSLOCG00000005750 Lepisosteus oculatus ENSLOCG00000005750 I
GFI1B Meleagris gallopavo ENSMGAG00000006129 I
GFI1 Meleagris gallopavo ENSMGAG00000008187 I
GFI1B Myotis lucifugus ENSMLUG00000006673 I
GFI1 Myotis lucifugus ENSMLUG00000015191 I
ENSMMUG00000005068 Macaca mulatta ENSMMUG00000005068 I
GFI1B Macaca mulatta ENSMMUG00000005948 I
GFI1 Monodelphis domestica ENSMODG00000011802 I
GFI1B Monodelphis domestica ENSMODG00000012600 I
ENSMPUG00000004178 Mustela putorius furo ENSMPUG00000004178 I
ENSMPUG00000012489 Mustela putorius furo ENSMPUG00000012489 I
Gfi1b Mus musculus ENSMUSG00000026815 D
Gfi1 Mus musculus ENSMUSG00000029275 D
ENSNLEG00000010470 Nomascus leucogenys ENSNLEG00000010470 I
ENSNLEG00000012963 Nomascus leucogenys ENSNLEG00000012963 I
GFI1B Ornithorhynchus anatinus ENSOANG00000014723 I
GFI1B Oryctolagus cuniculus ENSOCUG00000001793 I
GFI1B Otolemur garnettii ENSOGAG00000008879 I
GFI1 Otolemur garnettii ENSOGAG00000027913 I
ENSONIG00000010573 Oreochromis niloticus ENSONIG00000010573 I
ENSONIG00000013011 Oreochromis niloticus ENSONIG00000013011 I
ENSONIG00000019246 Oreochromis niloticus ENSONIG00000019246 I
GFI1 Ochotona princeps ENSOPRG00000001473 I
gfi1aa Oryzias latipes ENSORLG00000005060 I
gfi1b Oryzias latipes ENSORLG00000014390 I
ENSP00000361195 Macaca fascicularis ENSP00000361195 I
ENSP00000399719 Macaca fascicularis ENSP00000399719 I
ENSPANG00000016433 Papio anubis ENSPANG00000016433 I
ENSPANG00000024216 Papio anubis ENSPANG00000024216 I
GFI1B Procavia capensis ENSPCAG00000012329 I
ENSPFOG00000003460 Poecilia formosa ENSPFOG00000003460 I
ENSPFOG00000017327 Poecilia formosa ENSPFOG00000017327 I
ENSPFOG00000023214 Poecilia formosa ENSPFOG00000023214 I
ENSPPYG00000019718 Pongo abelii ENSPPYG00000019718 I
ENSPSIG00000008734 Pelodiscus sinensis ENSPSIG00000008734 I
ENSPSIG00000012112 Pelodiscus sinensis ENSPSIG00000012112 I
GFI1B Pan troglodytes ENSPTRG00000021505 I
GFI1 Pteropus vampyrus ENSPVAG00000006928 I
Gfi1 Rattus norvegicus ENSRNOG00000002042 D
Gfi1b Rattus norvegicus ENSRNOG00000011353 I
GFI1B Sus scrofa ENSSSCG00000005737 I
GFI1 Sus scrofa ENSSSCG00000006902 I
ENSSTOG00000014583 Ictidomys tridecemlineatus ENSSTOG00000014583 I
ENSSTOG00000022285 Ictidomys tridecemlineatus ENSSTOG00000022285 I
GFI1 Taeniopygia guttata ENSTGUG00000006060 I
gfi1ab Tetraodon nigroviridis ENSTNIG00000000651 I
gfi1b Tetraodon nigroviridis ENSTNIG00000003834 I
gfi1ab Takifugu rubripes ENSTRUG00000000415 I
gfi1b Takifugu rubripes ENSTRUG00000004525 I
gfi1aa Takifugu rubripes ENSTRUG00000004744 I
GFI1 Tursiops truncatus ENSTTRG00000000082 I
ENSXMAG00000009274 Xiphophorus maculatus ENSXMAG00000009274 I
e_gw.11.853.1 Branchiostoma floridae e_gw.11.853.1 I
sens-2 Drosophila melanogaster FBgn0051632 D
GA16348 Drosophila pseudoobscura FBgn0076363 I
GF15430 Drosophila ananassae FBgn0092455 I
GG10437 Drosophila erecta FBgn0102746 I
GH13715 Drosophila grimshawi FBgn0121191 I
GI23984 Drosophila mojavensis FBgn0146708 I
GL26188 Drosophila persimilis FBgn0163770 I
GM16223 Drosophila sechellia FBgn0171139 I
GJ21268 Drosophila virilis FBgn0208401 I
GK24242 Drosophila willistoni FBgn0226203 I
GE14143 Drosophila yakuba FBgn0231766 I
Gfo_R007994 Geospiza fortis Gfo_R007994 I
Gfo_R010648 Geospiza fortis Gfo_R010648 I
LotgiG129344 Lottia gigantea LotgiG129344 I
LotgiG83709 Lottia gigantea LotgiG83709 I
MDOA011065 Musca domestica MDOA011065 I
Myotis_brandtii_GFI1B_10010118 Myotis brandtii Myotis_brandtii_GFI1B_10010118 I
Ogr09401 Ophisaurus gracilis Ogr09401 I
Pvit_00259 Pogona vitticeps Pvit_00259 I
Sakowv30015302m.g Saccoglossus kowalevskii Sakowv30015302m.g I
Sakowv30015313m.g Saccoglossus kowalevskii Sakowv30015313m.g I
SPU_012645 Strongylocentrotus purpuratus SPU_012645 I
Tal_R001363 Tyto alba Tal_R001363 I
tetur16g01570 Tetranychus urticae tetur16g01570 I
gfi1b Xenopus tropicalis XB-GENE-944426 I
gfi1b.L Xenopus laevis XB-GENE-944429 I
gfi1 Xenopus tropicalis XB-GENE-960553 I