SELMODRAFT_402810 (Selaginella moellendorffii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 SELMODRAFT_402810 T005158_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LEP
M06661_2.00 		Arabidopsis thaliana
NBCKCCGCCGYHDHHDYHNHH
DDNDRHDDHDRCGGCGGMGVN		 Dap-seq
OMalley et al.(2016)
LEP_col_a 		0.770 0.780
ERF14
M01045_2.00 		Arabidopsis thaliana
NVGCCGNCN
NGNCGGCBN		 PBM
Sullivan et al.(2014)
pTH9793 		0.762 0.800
Q84J59_MAIZE
M09717_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BD1_01 		0.746 0.740
ERF7
M01617_2.00 		Arabidopsis thaliana
NGCCGNMNNN
NNNKNCGGCN		 PBM
Weirauch et al.(2014)
pTH7606 		0.744 0.720
ERF7
M06620_2.00 		Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD
HGRCGGCGGHGRHRRNRDNDR		 Dap-seq
OMalley et al.(2016)
ERF7_col_a 		0.744 0.720
ERF7
M06621_2.00 		Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH
DYGGCGGCGSHDDNDNNDNNN		 Dap-seq
OMalley et al.(2016)
ERF7_colamp_a 		0.744 0.720
ERF086
M06663_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYHD
HDRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
PUCHI_col_a 		0.738 0.740
ERF086
M06664_2.00 		Arabidopsis thaliana
NNNNHDHCKCCGCCGYHDHHDHNNN
NNNDHDDHDRCGGCGGMGDHDNNNN		 Dap-seq
OMalley et al.(2016)
PUCHI_colamp_a 		0.738 0.740
ERF4
M01616_2.00 		Arabidopsis thaliana
VCGCCGCC
GGCGGCGB		 PBM
Weirauch et al.(2014)
pTH8156 		0.726 0.780
ERF4
M06616_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRHHD
HDDYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF4_col_a 		0.726 0.780
ERF4
M06617_2.00 		Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN
NNHDDYGRCGGCGSNDNNDN		 Dap-seq
OMalley et al.(2016)
ERF4_colamp_a 		0.726 0.780
ERF096
M01630_2.00 		Arabidopsis thaliana
NVGCCGNCNN
NNGNCGGCBN		 PBM
Weirauch et al.(2014)
pTH7909 		0.718 0.780
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.717 0.760
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.717 0.760
ERF087
M06573_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYYD
HRRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
AT1G28160_col_a 		0.713 0.740
ERF087
M06574_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYCR
YGRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
AT1G28160_colamp_a 		0.713 0.740
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.710 0.720
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.710 0.720
ERF4_TOBAC
M09728_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_02 		0.710 0.740
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.700 0.680
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.700 0.680
ERF095
M06624_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRYHD
HDRYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ESE1_col_a 		0.696 0.700
ERF095
M06625_2.00 		Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH
DRHGGCGGCGGHDRHRRNDR		 Dap-seq
OMalley et al.(2016)
ESE1_colamp_a 		0.696 0.700
ERF2
M01631_2.00 		Arabidopsis thaliana
NNNGCCGNCN
NGNCGGCNNN		 PBM
Weirauch et al.(2014)
pTH8113 		0.694 0.680
ERF2
M06672_2.00 		Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND
HNRYGGCGGCGRHDRNDDNDD		 Dap-seq
OMalley et al.(2016)
ERF2_col_a 		0.694 0.680
ERF2
M06673_2.00 		Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR
YGGCGGCKSHDNNDNNNNNNN		 Dap-seq
OMalley et al.(2016)
ERF2_colamp_a 		0.694 0.680
ERF10
M06562_2.00 		Arabidopsis thaliana
NNHNNHNHHDYCGCCGCCRYN
NRYGGCGGCGRHDDNDNNDNN		 Dap-seq
OMalley et al.(2016)
ERF10_col_a 		0.693 0.720
ERF10
M06563_2.00 		Arabidopsis thaliana
HDSCGCCGCCRHHDNNNNNN
NNNNNNHDDYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF10_colamp_a 		0.693 0.720
ERF8
M01608_2.00 		Arabidopsis thaliana
MGCCGNMNNN
NNNKNCGGCK		 PBM
Weirauch et al.(2014)
pTH8095 		0.689 0.740
ERF8
M06586_2.00 		Arabidopsis thaliana
NYHDYCKCCGCCGYH
DRCGGCGGMGRHDRN		 Dap-seq
OMalley et al.(2016)
ERF8_col_a 		0.689 0.740
ERF8
M06587_2.00 		Arabidopsis thaliana
HNNHDSCGCCGYCRHHDN
NHDDYGRCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
ERF8_colamp_a 		0.689 0.740
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ38692 AP2 30 81

Links

Other AP2 family TFs
Other Selaginella moellendorffii TFs

1183 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28281.m000379 Ricinus communis 28281.m000379 I
29889.m003372 Ricinus communis 29889.m003372 I
AMTR_s00038p00173360 Amborella trichopoda AMTR_s00038p00173360 I
AMTR_s00045p00052450 Amborella trichopoda AMTR_s00045p00052450 I
Aquca_003_00380 Aquilegia coerulea Aquca_003_00380 I
Aquca_008_00132 Aquilegia coerulea Aquca_008_00132 I
Aquca_010_00201 Aquilegia coerulea Aquca_010_00201 I
CMTA3 Arabidopsis thaliana AT2G22300 D
EICBP.B Arabidopsis thaliana AT5G09410 D
CMTA2 Arabidopsis thaliana AT5G64220 D
BGIOSGA011302 Oryza indica BGIOSGA011302 I
BGIOSGA012779 Oryza indica BGIOSGA012779 I
BGIOSGA023886 Oryza indica BGIOSGA023886 I
BGIOSGA032809 Oryza indica BGIOSGA032809 I
Bo4g136970 Brassica oleracea Bo4g136970 I
Bo4g149510 Brassica oleracea Bo4g149510 I
Bo9g018010 Brassica oleracea Bo9g018010 I
Bo9g174050 Brassica oleracea Bo9g174050 I
Bostr.0568s0382 Boechera stricta Bostr.0568s0382 I
Bostr.13129s0055 Boechera stricta Bostr.13129s0055 I
Bostr.5022s0003 Boechera stricta Bostr.5022s0003 I
Bra009382 Brassica rapa Bra009382 I
Bra030248 Brassica rapa Bra030248 I
Bra037769 Brassica rapa Bra037769 I
Bra038534 Brassica rapa Bra038534 I
BRADI1G21372 Brachypodium distachyon BRADI1G21372 I
BRADI1G60817 Brachypodium distachyon BRADI1G60817 I
BRADI1G71810 Brachypodium distachyon BRADI1G71810 I
BRADI3G23800 Brachypodium distachyon BRADI3G23800 I
Cagra.0248s0103 Capsella grandiflora Cagra.0248s0103 I
Cagra.1365s0113 Capsella grandiflora Cagra.1365s0113 I
Cagra.2300s0004 Capsella grandiflora Cagra.2300s0004 I
Carubv10000120m.g Capsella rubella Carubv10000120m.g I
Carubv10024738m.g Capsella rubella Carubv10024738m.g I
Carubv10025787m.g Capsella rubella Carubv10025787m.g I
cassava1518.valid.m1 Manihot esculenta cassava1518.valid.m1 I
Ca_05255 Cicer arietinum Ca_05255 I
Ca_09562 Cicer arietinum Ca_09562 I
chr4.CM0182.510.nc Lotus japonicus chr4.CM0182.510.nc I
chr4.LjT13D08.100.nd Lotus japonicus chr4.LjT13D08.100.nd I
chr6.CM0314.100.nd Lotus japonicus chr6.CM0314.100.nd I
Ciclev10004234m.g Citrus clementina Ciclev10004234m.g I
Ciclev10024764m.g Citrus clementina Ciclev10024764m.g I
Ciclev10029792m.g Citrus clementina Ciclev10029792m.g I
Cla013051 Citrullus lanatus Cla013051 I
Cla018421 Citrullus lanatus Cla018421 I
Cucsa.217940 Cucumis sativus Cucsa.217940 I
Eucgr.H04783 Eucalyptus grandis Eucgr.H04783 I
Eucgr.I02662 Eucalyptus grandis Eucgr.I02662 I
evm.TU.supercontig_146.41 Carica papaya evm.TU.supercontig_146.41 I
evm.TU.supercontig_213.9 Carica papaya evm.TU.supercontig_213.9 I
F775_11311 Aegilops tauschii F775_11311 I
F775_29292 Aegilops tauschii F775_29292 I
CAMTA3 Arabidopsis lyrata fgenesh2_kg.4__153__AT2G22300.2 I
EICBP.B Arabidopsis lyrata fgenesh2_kg.6__888__AT5G09410.2 I
gene29100-v1.0-hybrid Fragaria vesca gene29100-v1.0-hybrid I
GLYMA05G24430 Glycine max GLYMA05G24430 I
GLYMA05G31190 Glycine max GLYMA05G31190 I
GLYMA08G07680 Glycine max GLYMA08G07680 I
GLYMA08G14370 Glycine max GLYMA08G14370 I
GLYMA08G19101 Glycine max GLYMA08G19101 I
GLYMA15G05900 Glycine max GLYMA15G05900 I
GLYMA17G04310 Glycine max GLYMA17G04310 I
Gorai.005G220600 Gossypium raimondii Gorai.005G220600 I
Gorai.008G089900 Gossypium raimondii Gorai.008G089900 I
Gorai.011G204700 Gossypium raimondii Gorai.011G204700 I
Gorai.013G061100 Gossypium raimondii Gorai.013G061100 I
GRMZM2G341747 Zea mays GRMZM2G341747 I
GRMZM2G431243 Zea mays GRMZM2G431243 I
GRMZM2G447551 Zea mays GRMZM2G447551 I
GSMUA_Achr1G21540_001 Musa acuminata GSMUA_Achr1G21540_001 I
GSMUA_Achr3G08460_001 Musa acuminata GSMUA_Achr3G08460_001 I
GSMUA_Achr3G21310_001 Musa acuminata GSMUA_Achr3G21310_001 I
GSMUA_Achr6G10390_001 Musa acuminata GSMUA_Achr6G10390_001 I
GSMUA_AchrUn_randomG02100_001 Musa acuminata GSMUA_AchrUn_randomG02100_001 I
GSMUA_AchrUn_randomG08930_001 Musa acuminata GSMUA_AchrUn_randomG08930_001 I
gw1.188.72.1 Physcomitrella patens gw1.188.72.1 I
LPERR03G05920 Leersia perrieri LPERR03G05920 I
LPERR03G17060 Leersia perrieri LPERR03G17060 I
LPERR07G19680 Leersia perrieri LPERR07G19680 I
LPERR10G05550 Leersia perrieri LPERR10G05550 I
Lus10003405.g Linum usitatissimum Lus10003405.g I
Lus10041704.g Linum usitatissimum Lus10041704.g I
MDP0000139862 Malus domestica MDP0000139862 I
MDP0000290409 Malus domestica MDP0000290409 I
mgf010601m Mimulus guttatus mgf010601m I
mgf015897m Mimulus guttatus mgf015897m I
mgf024932m Mimulus guttatus mgf024932m I
MLOC_38704 Hordeum vulgare MLOC_38704 I
MLOC_63299 Hordeum vulgare MLOC_63299 I
MTR_2g008840 Medicago truncatula MTR_2g008840 I
MTR_8g090205 Medicago truncatula MTR_8g090205 I
OB03G16740 Oryza brachyantha OB03G16740 I
OB03G29080 Oryza brachyantha OB03G29080 I
OB07G28190 Oryza brachyantha OB07G28190 I
OB10G16130 Oryza brachyantha OB10G16130 I
OBART03G06570 Oryza barthii OBART03G06570 I
OBART03G19880 Oryza barthii OBART03G19880 I
OBART07G22710 Oryza barthii OBART07G22710 I
OBART10G08060 Oryza barthii OBART10G08060 I
OGLUM03G06680 Oryza glumaepatula OGLUM03G06680 I
OGLUM03G20490 Oryza glumaepatula OGLUM03G20490 I
OGLUM07G22660 Oryza glumaepatula OGLUM07G22660 I
OGLUM10G07770 Oryza glumaepatula OGLUM10G07770 I
OLONG_001033 Oryza longistaminata OLONG_001033 I
OLONG_003971 Oryza longistaminata OLONG_003971 I
OLONG_004418 Oryza longistaminata OLONG_004418 I
OLONG_018130 Oryza longistaminata OLONG_018130 I
OMERI03G06500 Oryza meridionalis OMERI03G06500 I
OMERI03G17850 Oryza meridionalis OMERI03G17850 I
ONIVA02G06230 Oryza nivara ONIVA02G06230 I
ONIVA03G21570 Oryza nivara ONIVA03G21570 I
ONIVA07G22160 Oryza nivara ONIVA07G22160 I
ONIVA10G07730 Oryza nivara ONIVA10G07730 I
OPUNC03G06340 Oryza punctata OPUNC03G06340 I
OPUNC03G18730 Oryza punctata OPUNC03G18730 I
OPUNC07G21310 Oryza punctata OPUNC07G21310 I
OPUNC10G06950 Oryza punctata OPUNC10G06950 I
orange1.1g001365m.g Citrus sinensis orange1.1g001365m.g I
orange1.1g001406m.g Citrus sinensis orange1.1g001406m.g I
orange1.1g001759m.g Citrus sinensis orange1.1g001759m.g I
ORGLA03G0064000 Oryza glaberrima ORGLA03G0064000 I
ORGLA07G0175700 Oryza glaberrima ORGLA07G0175700 I
ORGLA10G0066800 Oryza glaberrima ORGLA10G0066800 I
ORGLA10G0167300 Oryza glaberrima ORGLA10G0167300 I
ORUFI03G06510 Oryza rufipogon ORUFI03G06510 I
ORUFI03G20520 Oryza rufipogon ORUFI03G20520 I
ORUFI07G23760 Oryza rufipogon ORUFI07G23760 I
ORUFI10G08490 Oryza rufipogon ORUFI10G08490 I
OS03G0191000 Oryza sativa OS03G0191000 I
OS10G0375600 Oryza sativa OS10G0375600 I
Pavir.Ba00386 Panicum virgatum Pavir.Ba00386 I
Pavir.Ia02749 Panicum virgatum Pavir.Ia02749 I
Pavir.Ia03131 Panicum virgatum Pavir.Ia03131 I
Pavir.Ib01843 Panicum virgatum Pavir.Ib01843 I
Pavir.Ib02991 Panicum virgatum Pavir.Ib02991 I
Pavir.J35200 Panicum virgatum Pavir.J35200 I
Pavir.J38535 Panicum virgatum Pavir.J38535 I
PK04004.1 Cannabis sativa PK04004.1 I
PK28233.1 Cannabis sativa PK28233.1 I
Pm002007 Prunus mume Pm002007 I
Pm008450 Prunus mume Pm008450 I
POPTR_0005s07660 Populus trichocarpa POPTR_0005s07660 I
POPTR_0007s05410 Populus trichocarpa POPTR_0007s05410 I
PRUPE_ppa000912mg Prunus persica PRUPE_ppa000912mg I
SapurV1A.0039s0030 Salix purpurea SapurV1A.0039s0030 I
SapurV1A.0072s0470 Salix purpurea SapurV1A.0072s0470 I
SapurV1A.0403s0170 Salix purpurea SapurV1A.0403s0170 I
Sb0012s010230 Sorghum bicolor Sb0012s010230 I
Sb01g033650 Sorghum bicolor Sb01g033650 I
Sb01g044480 Sorghum bicolor Sb01g044480 I
Sb02g039710 Sorghum bicolor Sb02g039710 I
scaffold_803130.1 Arabidopsis lyrata scaffold_803130.1 I
SELMODRAFT_413101 Selaginella moellendorffii SELMODRAFT_413101 I
SELMODRAFT_441667 Selaginella moellendorffii SELMODRAFT_441667 I
Si028797m.g Setaria italica Si028797m.g I
Si034046m.g Setaria italica Si034046m.g I
Si034054m.g Setaria italica Si034054m.g I
Si034076m.g Setaria italica Si034076m.g I
Solyc01g057270.2 Solanum lycopersicum Solyc01g057270.2 N
Solyc01g105230.2 Solanum lycopersicum Solyc01g105230.2 I
Solyc04g056270.2 Solanum lycopersicum Solyc04g056270.2 I
TCM_001108 Theobroma cacao TCM_001108 I
TCM_007482 Theobroma cacao TCM_007482 I
TCM_021468 Theobroma cacao TCM_021468 I
Thhalv10000026m.g Eutrema salsugineum Thhalv10000026m.g I
Thhalv10003564m.g Eutrema salsugineum Thhalv10003564m.g I
Thhalv10012552m.g Eutrema salsugineum Thhalv10012552m.g I
Traes_2AS_506D953C1 Triticum aestivum Traes_2AS_506D953C1 I
Traes_2DS_D05DC56BD Triticum aestivum Traes_2DS_D05DC56BD I
Traes_4AL_2F7E6536A Triticum aestivum Traes_4AL_2F7E6536A I
Traes_4DL_C2F35966E Triticum aestivum Traes_4DL_C2F35966E I
Traes_5BL_92902F993 Triticum aestivum Traes_5BL_92902F993 I
TRIUR3_23040 Triticum urartu TRIUR3_23040 I
TRIUR3_23792 Triticum urartu TRIUR3_23792 I
VIT_05s0020g00630 Vitis vinifera VIT_05s0020g00630 I
CAMTA3 Vitis vinifera VIT_07s0141g00250 I