CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SELMODRAFT_420500
(
Selaginella moellendorffii
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
SELMODRAFT_420500
T005171_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
abi4
M02648_2.00
Zea mays
CGSYGCYBYB
VRVRGCRSCG
SELEX
Mathelier et al.(2014)
MA0123.1
0.717
0.776
abi4
M09706_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABI4_01
0.717
0.776
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ18141
AP2
66
116
TYRGVRQRSWGRWVAEIREPRRRTRVWLGTFATAQDAAQAYDMAAWRLYGS
Links
Other
AP2
family TFs
Other
Selaginella moellendorffii
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG009660.1
Alligator sinensis
Alligator_sinensis_CCG009660.1
I
0.000
Cmyd_10014540
Chelonia mydas
Cmyd_10014540
I
0.000
ENSAPLG00000002994
Anas platyrhynchos
ENSAPLG00000002994
N
0.000
prox1a
Oryzias latipes
ENSORLG00000014947
I
0.000
ENSPFOG00000003774
Poecilia formosa
ENSPFOG00000003774
I
0.000
Myotis_brandtii_Prox1_10018243
Myotis brandtii
Myotis_brandtii_Prox1_10018243
I
0.000