CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG009660.1
(
Alligator sinensis
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05044 (HPD)
IPR007738
Alligator_sinensis_CCG009660.1
T316624_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PROX1
M03445_2.00
Homo sapiens
BAAGRCGTCTTV
BAAGACGYCTTV
SELEX
Jolma et al.(2013)
PROX1_1
0.719
0.719
PROX1
M05691_2.00
Homo sapiens
BAMGRCGTCDTV
BAHGACGYCKTV
SELEX
Yin et al.(2017)
PROX1_eDBD_HT-SELEX
0.719
0.719
PROX1
M05692_2.00
Homo sapiens
BAAGRYGTCTTV
BAAGACRYCTTV
SELEX
Yin et al.(2017)
PROX1_eDBD_Methyl-HT-SELEX
0.719
0.719
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG009660.1
Prospero
307
435
TYPVSLRGFNRCITSQLIKWFSNFREFYYIQMEKFARQAILEGVTDCKDLMVSRNSELFRALNMHYNKGNDFEVPDRFLEVASLTLQEFFSAVKAGKDSDPSWKKPIYKIISKLDSDIPEAFKSSSCPQ
Links
Other
Prospero
family TFs
Other
Alligator sinensis
TFs
93 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10014540
Chelonia mydas
Cmyd_10014540
I
0.875
ENSPSIG00000017015
Pelodiscus sinensis
ENSPSIG00000017015
I
0.867
PROX2
Tursiops truncatus
ENSTTRG00000001912
I
0.844
PROX2
Callithrix jacchus
ENSCJAG00000020548
I
0.836
PROX2
Felis catus
ENSFCAG00000028658
I
0.836
ENSMEUG00000002316
Macropus eugenii
ENSMEUG00000002316
I
0.836
ENSSHAG00000018304
Sarcophilus harrisii
ENSSHAG00000018304
I
0.836
ENSAMEG00000018305
Ailuropoda melanoleuca
ENSAMEG00000018305
I
0.828
ENSCSAG00000012283
Chlorocebus sabaeus
ENSCSAG00000012283
I
0.828
PROX2
Dasypus novemcinctus
ENSDNOG00000005528
I
0.828
ENSECAG00000023529
Equus caballus
ENSECAG00000023529
I
0.828
ENSFALG00000006312
Ficedula albicollis
ENSFALG00000006312
I
0.828
PROX2
Gorilla gorilla
ENSGGOG00000022893
I
0.828
ENSMPUG00000009289
Mustela putorius furo
ENSMPUG00000009289
I
0.828
ENSPANG00000024084
Papio anubis
ENSPANG00000024084
I
0.828
PROX2
Pan troglodytes
ENSPTRG00000006542
I
0.828
PROX2
Pteropus vampyrus
ENSPVAG00000000659
I
0.828
ENSTGUG00000012170
Taeniopygia guttata
ENSTGUG00000012170
I
0.828
PROX2
Canis familiaris
ENSCAFG00000016985
I
0.820
PROX2
Myotis lucifugus
ENSMLUG00000005898
I
0.820
ENSOARG00000001473
Ovis aries
ENSOARG00000001473
I
0.820
PROX2
Homo sapiens
ENSG00000119608
I
0.812
PROX2
Vicugna pacos
ENSVPAG00000003072
I
0.812
PROX2
Loxodonta africana
ENSLAFG00000012545
I
0.805
PROX2
Choloepus hoffmanni
ENSCHOG00000000477
I
0.797
ENSSTOG00000023253
Ictidomys tridecemlineatus
ENSSTOG00000023253
I
0.797
Brh_R009461
Buceros rhinoceros
Brh_R009461
I
0.797
PROX2
Macaca mulatta
ENSMMUG00000004259
N
0.795
PROX2
Ochotona princeps
ENSOPRG00000011820
I
0.789
Pvit_01205
Pogona vitticeps
Pvit_01205
I
0.781
ENSGALG00000023113
Gallus gallus
ENSGALG00000023113
N
0.773
ENSLACG00000018909
Latimeria chalumnae
ENSLACG00000018909
I
0.773
ENSLOCG00000010701
Lepisosteus oculatus
ENSLOCG00000010701
I
0.766
PROX2
Meleagris gallopavo
ENSMGAG00000012715
N
0.766
ENSONIG00000020193
Oreochromis niloticus
ENSONIG00000020193
I
0.758
ENSPFOG00000015503
Poecilia formosa
ENSPFOG00000015503
I
0.758
ENSAPLG00000002994
Anas platyrhynchos
ENSAPLG00000002994
N
0.754
ENSPFOG00000014635
Poecilia formosa
ENSPFOG00000014635
I
0.750
Prox2
Rattus norvegicus
ENSRNOG00000005054
I
0.750
prox2
Tetraodon nigroviridis
ENSTNIG00000017414
I
0.750
prox2
Takifugu rubripes
ENSTRUG00000018353
I
0.750
ENSGMOG00000015166
Gadus morhua
ENSGMOG00000015166
I
0.742
ENSONIG00000013518
Oreochromis niloticus
ENSONIG00000013518
I
0.742
prox1a
Oryzias latipes
ENSORLG00000014947
I
0.742
ENSPFOG00000003774
Poecilia formosa
ENSPFOG00000003774
I
0.742
ENSTRUG00000012738
Takifugu rubripes
ENSTRUG00000012738
I
0.742
Myotis_brandtii_PROX2_10012935
Myotis brandtii
Myotis_brandtii_PROX2_10012935
I
0.739
ENSAMXG00000014376
Astyanax mexicanus
ENSAMXG00000014376
I
0.734
prox2
Gasterosteus aculeatus
ENSGACG00000007538
I
0.734
ENSGMOG00000009022
Gadus morhua
ENSGMOG00000009022
I
0.734
ENSLOCG00000002197
Lepisosteus oculatus
ENSLOCG00000002197
I
0.734
ENSORLG00000001996
Oryzias latipes
ENSORLG00000001996
I
0.734
ENSXMAG00000003709
Xiphophorus maculatus
ENSXMAG00000003709
I
0.734
ENSAMEG00000015776
Ailuropoda melanoleuca
ENSAMEG00000015776
I
0.719
ENSAPLG00000010950
Anas platyrhynchos
ENSAPLG00000010950
I
0.719
PROX1
Bos taurus
ENSBTAG00000010978
I
0.719
PROX1
Canis familiaris
ENSCAFG00000012445
I
0.719
PROX1
Callithrix jacchus
ENSCJAG00000015514
I
0.719
PROX1
Cavia porcellus
ENSCPOG00000011987
I
0.719
PROX1
Equus caballus
ENSECAG00000019220
I
0.719
ENSFALG00000012357
Ficedula albicollis
ENSFALG00000012357
I
0.719
PROX1
Felis catus
ENSFCAG00000029702
I
0.719
PROX1
Homo sapiens
ENSG00000117707
D
0.719
PROX1
Gallus gallus
ENSGALG00000009791
I
0.719
PROX1
Gorilla gorilla
ENSGGOG00000015130
I
0.719
PROX1
Meleagris gallopavo
ENSMGAG00000009635
I
0.719
PROX1
Myotis lucifugus
ENSMLUG00000006993
I
0.719
PROX1
Macaca mulatta
ENSMMUG00000011914
I
0.719
ENSMPUG00000013456
Mustela putorius furo
ENSMPUG00000013456
I
0.719
Prox1
Mus musculus
ENSMUSG00000010175
I
0.719
ENSNLEG00000014435
Nomascus leucogenys
ENSNLEG00000014435
I
0.719
ENSOARG00000009324
Ovis aries
ENSOARG00000009324
I
0.719
PROX1
Otolemur garnettii
ENSOGAG00000017025
I
0.719
ENSPANG00000017714
Papio anubis
ENSPANG00000017714
I
0.719
ENSPPYG00000000224
Pongo abelii
ENSPPYG00000000224
I
0.719
ENSPSIG00000008098
Pelodiscus sinensis
ENSPSIG00000008098
I
0.719
PROX1
Pan troglodytes
ENSPTRG00000001974
I
0.719
Prox1
Rattus norvegicus
ENSRNOG00000003694
I
0.719
PROX1
Sus scrofa
ENSSSCG00000015584
I
0.719
PROX1
Taeniopygia guttata
ENSTGUG00000002974
I
0.719
Aan_R011488
Calypte anna
Aan_R011488
I
0.719
Afo_R004723
Aptenodytes forsteri
Afo_R004723
I
0.719
Alligator_sinensis_CCG014115.1
Alligator sinensis
Alligator_sinensis_CCG014115.1
I
0.719
Brh_R001903
Buceros rhinoceros
Brh_R001903
I
0.719
ENSBTAP00000014573-D1
Bos grunniens
ENSBTAP00000014573-D1
I
0.719
ENSP00000355925
Macaca fascicularis
ENSP00000355925
I
0.719
Gfo_R010932
Geospiza fortis
Gfo_R010932
I
0.719
Ogr11789
Ophisaurus gracilis
Ogr11789
I
0.719
Pvit_00353
Pogona vitticeps
Pvit_00353
I
0.719
Tal_R002989
Tyto alba
Tal_R002989
I
0.719
PROX1
Dasypus novemcinctus
ENSDNOG00000001297
I
0.711
ENSGMOG00000001679
Gadus morhua
ENSGMOG00000001679
I
0.711
Myotis_brandtii_Prox1_10018243
Myotis brandtii
Myotis_brandtii_Prox1_10018243
I
0.702