CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Si028088m.g
(
Setaria italica
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Si028088m.g
T005338_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF094
M01602_2.00
Arabidopsis thaliana
VGCCGCCD
HGGCGGCB
PBM
Weirauch et al.(2014)
pTH8276
0.789
0.824
P93392_TOBAC
M09731_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OPBP1_01
0.703
0.765
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si028088m
AP2
157
208
AFIGVRKRPWGKFAAEIRDSTRKGARVWIGTFDSPEAAALAYDQAAFAARGT
Links
Other
AP2
family TFs
Other
Setaria italica
TFs
270 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF507
Dasypus novemcinctus
ENSDNOG00000009394
N
ZNF507
Homo sapiens
ENSG00000168813
N
ENSPANG00000010840
Papio anubis
ENSPANG00000010840
N
ZNF507
Pan troglodytes
ENSPTRG00000010789
N