Solyc06g068360.2 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc06g068360.2 T005485_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.857 1.000
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.857 1.000
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.727 0.843
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc06g068360.2.1 AP2 6 57

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

298 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA001527 Oryza indica BGIOSGA001527 N
BGIOSGA001528 Oryza indica BGIOSGA001528 N
BGIOSGA026486 Oryza indica BGIOSGA026486 N
BGIOSGA035191 Oryza indica BGIOSGA035191 N
BRADI3G43000 Brachypodium distachyon BRADI3G43000 N
Ca_19047 Cicer arietinum Ca_19047 N
Cucsa.378840 Cucumis sativus Cucsa.378840 N
F775_22386 Aegilops tauschii F775_22386 N
F775_30314 Aegilops tauschii F775_30314 N
gene00954-v1.0-hybrid Fragaria vesca gene00954-v1.0-hybrid N
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N
GRMZM2G006585 Zea mays GRMZM2G006585 N
GRMZM2G171934 Zea mays GRMZM2G171934 N
GSMUA_Achr7G04460_001 Musa acuminata GSMUA_Achr7G04460_001 N
GSMUA_AchrUn_randomG07560_001 Musa acuminata GSMUA_AchrUn_randomG07560_001 N
LPERR01G15600 Leersia perrieri LPERR01G15600 N
LPERR08G20370 Leersia perrieri LPERR08G20370 N
MLOC_23439 Hordeum vulgare MLOC_23439 N
MLOC_26846 Hordeum vulgare MLOC_26846 N
OB01G27340 Oryza brachyantha OB01G27340 N
OB08G30470 Oryza brachyantha OB08G30470 N
OBART01G17820 Oryza barthii OBART01G17820 N
OBART01G17850 Oryza barthii OBART01G17850 N
OBART08G23610 Oryza barthii OBART08G23610 N
OGLUM01G21080 Oryza glumaepatula OGLUM01G21080 N
OGLUM01G21100 Oryza glumaepatula OGLUM01G21100 N
OGLUM08G25080 Oryza glumaepatula OGLUM08G25080 N
OLONG_020563 Oryza longistaminata OLONG_020563 N
OMERI01G16650 Oryza meridionalis OMERI01G16650 N
OMERI01G16670 Oryza meridionalis OMERI01G16670 N
OMERI08G18450 Oryza meridionalis OMERI08G18450 N
ONIVA08G26670 Oryza nivara ONIVA08G26670 N
OPUNC01G18340 Oryza punctata OPUNC01G18340 N
OPUNC01G18360 Oryza punctata OPUNC01G18360 N
OPUNC08G21610 Oryza punctata OPUNC08G21610 N
orange1.1g028583m.g Citrus sinensis orange1.1g028583m.g N
ORGLA01G0145800 Oryza glaberrima ORGLA01G0145800 N
ORGLA08G0190300 Oryza glaberrima ORGLA08G0190300 N
ORGLA11G0204800 Oryza glaberrima ORGLA11G0204800 N
ORUFI08G26100 Oryza rufipogon ORUFI08G26100 N
OS01G0517800 Oryza sativa OS01G0517800 N
OS01G0518000 Oryza sativa OS01G0518000 N
OS08G0560300 Oryza sativa OS08G0560300 N
Pavir.Ea01651 Panicum virgatum Pavir.Ea01651 N
Pavir.Eb01352 Panicum virgatum Pavir.Eb01352 N
Pavir.Eb02108 Panicum virgatum Pavir.Eb02108 N
Pavir.Fa00017 Panicum virgatum Pavir.Fa00017 N
Pavir.Fb02226 Panicum virgatum Pavir.Fb02226 N
Pavir.J13246 Panicum virgatum Pavir.J13246 N
PGSC0003DMG400008598 Solanum tuberosum PGSC0003DMG400008598 N
POPTR_0001s21990 Populus trichocarpa POPTR_0001s21990 N
POPTR_0009s00830 Populus trichocarpa POPTR_0009s00830 N
SapurV1A.0288s0160 Salix purpurea SapurV1A.0288s0160 N
Sb07g024020 Sorghum bicolor Sb07g024020 N
Sb08g005380 Sorghum bicolor Sb08g005380 N
Si004357m.g Setaria italica Si004357m.g N
Si004634m.g Setaria italica Si004634m.g N
Si004809m.g Setaria italica Si004809m.g N
Solyc10g085800.1 Solanum lycopersicum Solyc10g085800.1 N
TRAES3BF035900070CFD_g Triticum aestivum TRAES3BF035900070CFD_g N
TRAES3BF035900190CFD_g Triticum aestivum TRAES3BF035900190CFD_g N
Traes_3AL_970EF6E45 Triticum aestivum Traes_3AL_970EF6E45 N
Traes_3AL_CF608F443 Triticum aestivum Traes_3AL_CF608F443 N
Traes_3DL_6A5CA5C37 Triticum aestivum Traes_3DL_6A5CA5C37 N
Traes_3DL_96F825D26 Triticum aestivum Traes_3DL_96F825D26 N
Traes_7AS_9EA289C71 Triticum aestivum Traes_7AS_9EA289C71 N
Traes_7DS_620E0D488 Triticum aestivum Traes_7DS_620E0D488 N
TRIUR3_09966 Triticum urartu TRIUR3_09966 N
TRIUR3_27842 Triticum urartu TRIUR3_27842 N
TRIUR3_34039 Triticum urartu TRIUR3_34039 N