Pavir.Fa00017 (Panicum virgatum)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 Pavir.Fa00017 T316147_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fa00017.1.p PLATZ 72 150

Links

Other PLATZ family TFs
Other Panicum virgatum TFs

204 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Fb02226 Panicum virgatum Pavir.Fb02226 N 1.000
GRMZM2G171934 Zea mays GRMZM2G171934 N 0.987
Sb07g024020 Sorghum bicolor Sb07g024020 N 0.987
BRADI3G43000 Brachypodium distachyon BRADI3G43000 N 0.975
F775_22386 Aegilops tauschii F775_22386 N 0.975
MLOC_23439 Hordeum vulgare MLOC_23439 N 0.975
Traes_7AS_9EA289C71 Triticum aestivum Traes_7AS_9EA289C71 N 0.975
Traes_7DS_620E0D488 Triticum aestivum Traes_7DS_620E0D488 N 0.975
LPERR08G20370 Leersia perrieri LPERR08G20370 N 0.949
OB08G30470 Oryza brachyantha OB08G30470 N 0.949
BGIOSGA026486 Oryza indica BGIOSGA026486 N 0.937
OBART08G23610 Oryza barthii OBART08G23610 N 0.937
OGLUM08G25080 Oryza glumaepatula OGLUM08G25080 N 0.937
OLONG_020563 Oryza longistaminata OLONG_020563 N 0.937
OMERI08G18450 Oryza meridionalis OMERI08G18450 N 0.937
ONIVA08G26670 Oryza nivara ONIVA08G26670 N 0.937
OPUNC08G21610 Oryza punctata OPUNC08G21610 N 0.937
ORGLA08G0190300 Oryza glaberrima ORGLA08G0190300 N 0.937
ORUFI08G26100 Oryza rufipogon ORUFI08G26100 N 0.937
OS08G0560300 Oryza sativa OS08G0560300 N 0.937
TRIUR3_34039 Triticum urartu TRIUR3_34039 N 0.923
BGIOSGA035191 Oryza indica BGIOSGA035191 N 0.847
OGLUM11G11350 Oryza glumaepatula OGLUM11G11350 N 0.831
ONIVA07G06150 Oryza nivara ONIVA07G06150 N 0.831
ORUFI11G12030 Oryza rufipogon ORUFI11G12030 N 0.831
OBART11G11470 Oryza barthii OBART11G11470 N 0.814
ORGLA11G0098700 Oryza glaberrima ORGLA11G0098700 N 0.814
OS11G0428700 Oryza sativa OS11G0428700 N 0.814
PGSC0003DMG400008598 Solanum tuberosum PGSC0003DMG400008598 N 0.808
PRUPE_ppa011630mg Prunus persica PRUPE_ppa011630mg N 0.808
Solyc10g085800.1 Solanum lycopersicum Solyc10g085800.1 N 0.808
Pm026291 Prunus mume Pm026291 N 0.808
gene00954-v1.0-hybrid Fragaria vesca gene00954-v1.0-hybrid N 0.808
Ca_19047 Cicer arietinum Ca_19047 N 0.806
evm.TU.supercontig_5.128 Carica papaya evm.TU.supercontig_5.128 N 0.806
SapurV1A.0226s0270 Salix purpurea SapurV1A.0226s0270 N 0.806
PK29286.1 Cannabis sativa PK29286.1 N 0.806
GLYMA10G07240 Glycine max GLYMA10G07240 N 0.792
GLYMA13G21140 Glycine max GLYMA13G21140 N 0.792
GLYMA19G37220 Glycine max GLYMA19G37220 N 0.792
mgf023930m Mimulus guttatus mgf023930m N 0.792
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N 0.792
MLOC_26846 Hordeum vulgare MLOC_26846 N 0.785
POPTR_0001s21990 Populus trichocarpa POPTR_0001s21990 N 0.784
GLYMA03G34530 Glycine max GLYMA03G34530 N 0.778
MTR_1g062160 Medicago truncatula MTR_1g062160 N 0.778
MTR_7g102790 Medicago truncatula MTR_7g102790 N 0.778
TCM_022356 Theobroma cacao TCM_022356 N 0.778
VIT_08s0007g04560 Vitis vinifera VIT_08s0007g04560 N 0.778
Cucsa.378840 Cucumis sativus Cucsa.378840 N 0.778
F775_30314 Aegilops tauschii F775_30314 N 0.772
Traes_3AL_970EF6E45 Triticum aestivum Traes_3AL_970EF6E45 N 0.772
Traes_3AL_CF608F443 Triticum aestivum Traes_3AL_CF608F443 N 0.772
TRAES3BF035900070CFD_g Triticum aestivum TRAES3BF035900070CFD_g N 0.772
Traes_3DL_6A5CA5C37 Triticum aestivum Traes_3DL_6A5CA5C37 N 0.772
Traes_3DL_96F825D26 Triticum aestivum Traes_3DL_96F825D26 N 0.772
TRIUR3_09966 Triticum urartu TRIUR3_09966 N 0.772
TRIUR3_27842 Triticum urartu TRIUR3_27842 N 0.772
POPTR_0009s00830 Populus trichocarpa POPTR_0009s00830 N 0.770
Eucgr.B03915 Eucalyptus grandis Eucgr.B03915 N 0.770
SapurV1A.0360s0060 Salix purpurea SapurV1A.0360s0060 N 0.770
PK10752.1 Cannabis sativa PK10752.1 N 0.765
POPTR_0016s10920 Populus trichocarpa POPTR_0016s10920 N 0.764
Ca_00735 Cicer arietinum Ca_00735 N 0.764
Aquca_009_01064 Aquilegia coerulea Aquca_009_01064 N 0.764
Lus10027735.g Linum usitatissimum Lus10027735.g N 0.764
Lus10035554.g Linum usitatissimum Lus10035554.g N 0.764
SapurV1A.0288s0160 Salix purpurea SapurV1A.0288s0160 N 0.760
GSMUA_Achr7G04460_001 Musa acuminata GSMUA_Achr7G04460_001 N 0.759
TRAES3BF035900140CFD_g Triticum aestivum TRAES3BF035900140CFD_g N 0.759
TRAES3BF035900190CFD_g Triticum aestivum TRAES3BF035900190CFD_g N 0.759
Cla001071 Citrullus lanatus Cla001071 N 0.757
cassava28497.m1 Manihot esculenta cassava28497.m1 N 0.757
Cucsa.200310 Cucumis sativus Cucsa.200310 N 0.757
evm.TU.supercontig_30.61 Carica papaya evm.TU.supercontig_30.61 N 0.757
GSMUA_AchrUn_randomG07560_001 Musa acuminata GSMUA_AchrUn_randomG07560_001 N 0.753
GSMUA_Achr2G18160_001 Musa acuminata GSMUA_Achr2G18160_001 N 0.750
POPTR_0003s09160 Populus trichocarpa POPTR_0003s09160 N 0.750
Aquca_019_00150 Aquilegia coerulea Aquca_019_00150 N 0.750
mgf006916m Mimulus guttatus mgf006916m N 0.747
mgf013167m Mimulus guttatus mgf013167m N 0.747
orange1.1g028583m.g Citrus sinensis orange1.1g028583m.g N 0.743
OB01G27340 Oryza brachyantha OB01G27340 N 0.741
Lus10014396.g Linum usitatissimum Lus10014396.g N 0.738
BGIOSGA005806 Oryza indica BGIOSGA005806 N 0.736
BGIOSGA014451 Oryza indica BGIOSGA014451 N 0.736
GLYMA01G02180 Glycine max GLYMA01G02180 N 0.736
GLYMA09G33770 Glycine max GLYMA09G33770 N 0.736
GSMUA_Achr4G19110_001 Musa acuminata GSMUA_Achr4G19110_001 N 0.736
GSMUA_Achr5G18120_001 Musa acuminata GSMUA_Achr5G18120_001 N 0.736
LPERR02G23300 Leersia perrieri LPERR02G23300 N 0.736
MLOC_69202 Hordeum vulgare MLOC_69202 N 0.736
OB02G35810 Oryza brachyantha OB02G35810 N 0.736
OB04G30420 Oryza brachyantha OB04G30420 N 0.736
OBART02G28660 Oryza barthii OBART02G28660 N 0.736
OBART04G23520 Oryza barthii OBART04G23520 N 0.736
OGLUM02G29250 Oryza glumaepatula OGLUM02G29250 N 0.736
OGLUM04G23440 Oryza glumaepatula OGLUM04G23440 N 0.736
OLONG_023395 Oryza longistaminata OLONG_023395 N 0.736
ONIVA02G31400 Oryza nivara ONIVA02G31400 N 0.736
ONIVA04G22750 Oryza nivara ONIVA04G22750 N 0.736
OPUNC02G26310 Oryza punctata OPUNC02G26310 N 0.736
OPUNC04G21040 Oryza punctata OPUNC04G21040 N 0.736
ORGLA02G0246600 Oryza glaberrima ORGLA02G0246600 N 0.736
ORGLA04G0200500 Oryza glaberrima ORGLA04G0200500 N 0.736
ORUFI02G30220 Oryza rufipogon ORUFI02G30220 N 0.736
ORUFI04G25190 Oryza rufipogon ORUFI04G25190 N 0.736
OS02G0692700 Oryza sativa OS02G0692700 N 0.736
OS04G0591100 Oryza sativa OS04G0591100 N 0.736
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N 0.736
Sb06g027000 Sorghum bicolor Sb06g027000 N 0.736
Si010911m.g Setaria italica Si010911m.g N 0.736
Traes_6DL_CF3557CFC Triticum aestivum Traes_6DL_CF3557CFC N 0.736
VIT_02s0012g01400 Vitis vinifera VIT_02s0012g01400 N 0.736
Ca_11505 Cicer arietinum Ca_11505 N 0.736
Cla016461 Citrullus lanatus Cla016461 N 0.736
30054.m000824 Ricinus communis 30054.m000824 N 0.736
cassava2216.valid.m1 Manihot esculenta cassava2216.valid.m1 N 0.736
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N 0.736
Cucsa.313040 Cucumis sativus Cucsa.313040 N 0.736
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N 0.736
Eucgr.A01594 Eucalyptus grandis Eucgr.A01594 N 0.736
Eucgr.D02206 Eucalyptus grandis Eucgr.D02206 N 0.736
Eucgr.E00276 Eucalyptus grandis Eucgr.E00276 N 0.736
Lus10030968.g Linum usitatissimum Lus10030968.g N 0.736
Lus10040082.g Linum usitatissimum Lus10040082.g N 0.736
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N 0.736
Pavir.Ga00766 Panicum virgatum Pavir.Ga00766 N 0.736
Pavir.Gb00818 Panicum virgatum Pavir.Gb00818 N 0.736
Pavir.Eb02108 Panicum virgatum Pavir.Eb02108 N 0.734
Pavir.J13246 Panicum virgatum Pavir.J13246 N 0.734
29589.m001281 Ricinus communis 29589.m001281 N 0.733
BGIOSGA001528 Oryza indica BGIOSGA001528 N 0.728
OBART01G17820 Oryza barthii OBART01G17820 N 0.728
OGLUM01G21080 Oryza glumaepatula OGLUM01G21080 N 0.728
OPUNC01G18340 Oryza punctata OPUNC01G18340 N 0.728
Sb08g005380 Sorghum bicolor Sb08g005380 N 0.725
BRADI3G52170 Brachypodium distachyon BRADI3G52170 N 0.722
GLYMA08G36641 Glycine max GLYMA08G36641 N 0.722
GRMZM2G004548 Zea mays GRMZM2G004548 N 0.722
GRMZM2G091044 Zea mays GRMZM2G091044 N 0.722
GRMZM2G131280 Zea mays GRMZM2G131280 N 0.722
GSMUA_Achr11G17810_001 Musa acuminata GSMUA_Achr11G17810_001 N 0.722
GSMUA_Achr5G03420_001 Musa acuminata GSMUA_Achr5G03420_001 N 0.722
GSMUA_Achr5G13970_001 Musa acuminata GSMUA_Achr5G13970_001 N 0.722
LPERR04G19240 Leersia perrieri LPERR04G19240 N 0.722
MLOC_63157 Hordeum vulgare MLOC_63157 N 0.722
MTR_8g066820 Medicago truncatula MTR_8g066820 N 0.722
POPTR_0006s12100 Populus trichocarpa POPTR_0006s12100 N 0.722
Sb04g031230 Sorghum bicolor Sb04g031230 N 0.722
Si017318m.g Setaria italica Si017318m.g N 0.722
TRIUR3_30366 Triticum urartu TRIUR3_30366 N 0.722
Cla008966 Citrullus lanatus Cla008966 N 0.722
Cla018029 Citrullus lanatus Cla018029 N 0.722
cassava15058.m1 Manihot esculenta cassava15058.m1 N 0.722
Cucsa.321900 Cucumis sativus Cucsa.321900 N 0.722
Aquca_005_00468 Aquilegia coerulea Aquca_005_00468 N 0.722
Cagra.15046s0001 Capsella grandiflora Cagra.15046s0001 N 0.722
Carubv10024278m.g Capsella rubella Carubv10024278m.g N 0.722
Gorai.001G117900 Gossypium raimondii Gorai.001G117900 N 0.722
Pavir.Aa01152 Panicum virgatum Pavir.Aa01152 N 0.722
Pavir.Ab01769 Panicum virgatum Pavir.Ab01769 N 0.722
SapurV1A.0555s0010 Salix purpurea SapurV1A.0555s0010 N 0.722
SapurV1A.1507s0030 Salix purpurea SapurV1A.1507s0030 N 0.722
PK20928.1 Cannabis sativa PK20928.1 N 0.722
TCM_041560 Theobroma cacao TCM_041560 N 0.720
Pavir.Ea01651 Panicum virgatum Pavir.Ea01651 N 0.720
Pavir.Eb01352 Panicum virgatum Pavir.Eb01352 N 0.720
OMERI01G16650 Oryza meridionalis OMERI01G16650 N 0.716
ORGLA01G0145800 Oryza glaberrima ORGLA01G0145800 N 0.716
ORGLA11G0204800 Oryza glaberrima ORGLA11G0204800 N 0.716
OS01G0517800 Oryza sativa OS01G0517800 N 0.716
Si004809m.g Setaria italica Si004809m.g N 0.713
PRUPE_ppa011458mg Prunus persica PRUPE_ppa011458mg N 0.709
Pm001175 Prunus mume Pm001175 N 0.709
Pm012470 Prunus mume Pm012470 N 0.709
cassava9017.m1 Manihot esculenta cassava9017.m1 N 0.709
Gorai.009G411100 Gossypium raimondii Gorai.009G411100 N 0.709
Al_scaffold_0001_3341 Arabidopsis lyrata Al_scaffold_0001_3341 N 0.708
AMTR_s00008p00208550 Amborella trichopoda AMTR_s00008p00208550 N 0.708
AT1G32700 Arabidopsis thaliana AT1G32700 N 0.708
GLYMA01G11390 Glycine max GLYMA01G11390 N 0.708
GRMZM2G086403 Zea mays GRMZM2G086403 N 0.708
GSMUA_Achr4G27280_001 Musa acuminata GSMUA_Achr4G27280_001 N 0.708
GSMUA_Achr8G14740_001 Musa acuminata GSMUA_Achr8G14740_001 N 0.708
PRUPE_ppa010445mg Prunus persica PRUPE_ppa010445mg N 0.708
SELMODRAFT_69064 Selaginella moellendorffii SELMODRAFT_69064 N 0.708
SELMODRAFT_69065 Selaginella moellendorffii SELMODRAFT_69065 N 0.708
Ca_12361 Cicer arietinum Ca_12361 N 0.708
Pm022874 Prunus mume Pm022874 N 0.708
e_gw1.1.253.1 Physcomitrella patens e_gw1.1.253.1 N 0.708
Bostr.3359s0088 Boechera stricta Bostr.3359s0088 N 0.708
Cagra.4962s0001 Capsella grandiflora Cagra.4962s0001 N 0.708
Carubv10009979m.g Capsella rubella Carubv10009979m.g N 0.708
gene02186-v1.0-hybrid Fragaria vesca gene02186-v1.0-hybrid N 0.708
Lus10004577.g Linum usitatissimum Lus10004577.g N 0.708
LjSGA_028172.2 Lotus japonicus LjSGA_028172.2 N 0.708
Si004634m.g Setaria italica Si004634m.g N 0.707
AT2G27930 Arabidopsis thaliana AT2G27930 N 0.704
LPERR01G15600 Leersia perrieri LPERR01G15600 N 0.704
Bostr.27991s0138 Boechera stricta Bostr.27991s0138 N 0.704
Thhalv10017279m.g Eutrema salsugineum Thhalv10017279m.g N 0.704
MDP0000316069 Malus domestica MDP0000316069 N 0.703
GRMZM2G408887 Zea mays GRMZM2G408887 N 0.700