VIT_02s0025g04460 (Vitis vinifera)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 VIT_02s0025g04460 T006030_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.766 0.800
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.766 0.800
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.766 0.800
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.766 0.800
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.766 0.800
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.766 0.800
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.754 0.860
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.754 0.860
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.750 0.840
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.750 0.840
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.750 0.840
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.750 0.840
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.738 0.760
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.715 0.820
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.715 0.820
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.715 0.820
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.713 0.760
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.713 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_02s0025g04460.t01 AP2 65 116

Links

Other AP2 family TFs
Other Vitis vinifera TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R013968 Aptenodytes forsteri Afo_R013968 N
Brh_R010385 Buceros rhinoceros Brh_R010385 N
Cmyd_10005415 Chelonia mydas Cmyd_10005415 N
ENSAMEG00000007562 Ailuropoda melanoleuca ENSAMEG00000007562 N
ENSAPLG00000012018 Anas platyrhynchos ENSAPLG00000012018 N
ENSCAFG00000023754 Canis familiaris ENSCAFG00000023754 N
ENSCHOG00000004264 Choloepus hoffmanni ENSCHOG00000004264 N
ENSCPOG00000003956 Cavia porcellus ENSCPOG00000003956 N
ENSCSAG00000001057 Chlorocebus sabaeus ENSCSAG00000001057 N
ENSDNOG00000002252 Dasypus novemcinctus ENSDNOG00000002252 N
ENSECAG00000008368 Equus caballus ENSECAG00000008368 N
ENSETEG00000001618 Echinops telfairi ENSETEG00000001618 N
ENSFALG00000000604 Ficedula albicollis ENSFALG00000000604 N
ENSFCAG00000000744 Felis catus ENSFCAG00000000744 N
ZBTB8B Homo sapiens ENSG00000273274 N
ENSGGOG00000026784 Gorilla gorilla ENSGGOG00000026784 N
ENSLACG00000016238 Latimeria chalumnae ENSLACG00000016238 N
ENSLAFG00000023212 Loxodonta africana ENSLAFG00000023212 N
ENSLOCG00000000323 Lepisosteus oculatus ENSLOCG00000000323 N
ENSMGAG00000004943 Meleagris gallopavo ENSMGAG00000004943 N
ENSMLUG00000000818 Myotis lucifugus ENSMLUG00000000818 N
ENSMMUG00000019801 Macaca mulatta ENSMMUG00000019801 N
ENSMODG00000017428 Monodelphis domestica ENSMODG00000017428 N
ENSMPUG00000015225 Mustela putorius furo ENSMPUG00000015225 N
Zbtb8b Mus musculus ENSMUSG00000048485 N
ENSOANG00000001192 Ornithorhynchus anatinus ENSOANG00000001192 N
ENSOARG00000020934 Ovis aries ENSOARG00000020934 N
ENSOCUG00000011975 Oryctolagus cuniculus ENSOCUG00000011975 N
ENSOGAG00000013012 Otolemur garnettii ENSOGAG00000013012 N
ENSOPRG00000000880 Ochotona princeps ENSOPRG00000000880 N
ENSP00000291374 Macaca fascicularis ENSP00000291374 N
ENSP00000291374-D1 Bos grunniens ENSP00000291374-D1 N
ENSPANG00000016510 Papio anubis ENSPANG00000016510 N
ENSPCAG00000013117 Procavia capensis ENSPCAG00000013117 N
ENSPPYG00000001591 Pongo abelii ENSPPYG00000001591 N
ENSPTRG00000000485 Pan troglodytes ENSPTRG00000000485 N
Zbtb8b Rattus norvegicus ENSRNOG00000026898 N
ENSSARG00000013492 Sorex araneus ENSSARG00000013492 N
ENSSSCG00000022120 Sus scrofa ENSSSCG00000022120 N
ENSSTOG00000027615 Ictidomys tridecemlineatus ENSSTOG00000027615 N
ENSTGUG00000001374 Taeniopygia guttata ENSTGUG00000001374 N
ENSTSYG00000007928 Tarsius syrichta ENSTSYG00000007928 N
ENSTTRG00000003694 Tursiops truncatus ENSTTRG00000003694 N
Gfo_R011647 Geospiza fortis Gfo_R011647 N
Myotis_brandtii_ZBTB8B_10012392 Myotis brandtii Myotis_brandtii_ZBTB8B_10012392 N
Ogr05993 Ophisaurus gracilis Ogr05993 N
Pvit_17719 Pogona vitticeps Pvit_17719 N
zbtb8b Xenopus tropicalis XB-GENE-5788421 N
zbtb8b.S Xenopus laevis XB-GENE-5788447 N