VIT_16s0013g01110 (Vitis vinifera)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 VIT_16s0013g01110 T006126_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK02330.1
M01095_2.00 		Cannabis sativa
NNNGCCGBCN
NGVCGGCNNN		 PBM
Lambert et al.(2019)
pTH10093 		0.825 0.902
ERF105
M01632_2.00 		Arabidopsis thaliana
CGCCGGCM
KGCCGGCG		 PBM
Weirauch et al.(2014)
pTH7233 		0.821 0.824
ERF105
M06676_2.00 		Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR
YGGCGGCGVHDNNDNNNNNNNNDN		 Dap-seq
OMalley et al.(2016)
ERF105_colamp_a 		0.821 0.824
ERF105
M06677_2.00 		Arabidopsis thaliana
HDSCGCCGCCRYHDH
DHDRYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF105_col 		0.821 0.824
ERF5
M00721_2.00 		Arabidopsis thaliana
NNNGSMRNMN
NKNYKSCNNN		 PBM
Chang et al.(2013)
pTH7197 		0.811 0.863
ERF5
M06674_2.00 		Arabidopsis thaliana
YCDYCKCCGCCGYCD
HGRCGGCGGMGRHGR		 Dap-seq
OMalley et al.(2016)
ERF5_col_a 		0.811 0.863
ERF5
M06675_2.00 		Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN
NNNHDNHDRYGGCGGCGVHDN		 Dap-seq
OMalley et al.(2016)
ERF5_colamp_a 		0.811 0.863
ERF104
M06682_2.00 		Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH
DRYGGCGGCGGHKRHDDNN		 Dap-seq
OMalley et al.(2016)
ERF104_col_a 		0.811 0.745
ERF104
M06683_2.00 		Arabidopsis thaliana
BHDSCGCCGCCRYHD
HDRYGGCGGCGSHDV		 Dap-seq
OMalley et al.(2016)
ERF104_colamp_a 		0.811 0.745
ERF5_TOBAC
M09729_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF4_02 		0.809 0.863
ERF106
M01628_2.00 		Arabidopsis thaliana
NNNVCRVCN
NGBYGBNNN		 PBM
Weirauch et al.(2014)
pTH7426 		0.786 0.804
ERF096
M01630_2.00 		Arabidopsis thaliana
NVGCCGNCNN
NNGNCGGCBN		 PBM
Weirauch et al.(2014)
pTH7909 		0.763 0.745
ERF6
M01621_2.00 		Arabidopsis thaliana
NNGCCGGCVN
NBGCCGGCNN		 PBM
Weirauch et al.(2014)
pTH7228 		0.753 0.804
ERF6
M06637_2.00 		Arabidopsis thaliana
NHNHHDCCGCCGCCRYHDHHN
NDDHDRYGGCGGCGGHDDNDN		 Dap-seq
OMalley et al.(2016)
ERF6_col 		0.753 0.804
ERF2_TOBAC
M09727_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF2_01 		0.743 0.784
ERF14
M01045_2.00 		Arabidopsis thaliana
NVGCCGNCN
NGNCGGCBN		 PBM
Sullivan et al.(2014)
pTH9793 		0.739 0.745
ERF113
M01629_2.00 		Arabidopsis thaliana
NNGCCGHHNN
NNDDCGGCNN		 PBM
Weirauch et al.(2014)
pTH8097 		0.728 0.745
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.727 0.804
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.727 0.804
ERF1B
M01619_2.00 		Arabidopsis thaliana
NMGCCGCCRN
NYGGCGGCKN		 PBM
Weirauch et al.(2014)
pTH8795 		0.726 0.784
ERF1B
M06626_2.00 		Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN
NNNNNNNHDNHDRYGGCGGCKRHDNNDN		 Dap-seq
OMalley et al.(2016)
ERF1_col_a 		0.726 0.784
ERF1B
M06627_2.00 		Arabidopsis thaliana
MGCCGCCD
HGGCGGCK		 Dap-seq
OMalley et al.(2016)
ERF1_colamp_a 		0.726 0.784
ERF1B
M09703_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2_01 		0.726 0.784
ERF1B
M09704_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2 		0.726 0.784
ERF095
M06624_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRYHD
HDRYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ESE1_col_a 		0.718 0.765
ERF095
M06625_2.00 		Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH
DRHGGCGGCGGHDRHRRNDR		 Dap-seq
OMalley et al.(2016)
ESE1_colamp_a 		0.718 0.765
RAP2-2
M00719_2.00 		Arabidopsis thaliana
NNRBYGNN
NNCRVYNN		 PBM
Chang et al.(2013)
pTH7227 		0.710 0.686
ERF2
M01631_2.00 		Arabidopsis thaliana
NNNGCCGNCN
NGNCGGCNNN		 PBM
Weirauch et al.(2014)
pTH8113 		0.709 0.784
ERF2
M06672_2.00 		Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND
HNRYGGCGGCGRHDRNDDNDD		 Dap-seq
OMalley et al.(2016)
ERF2_col_a 		0.709 0.784
ERF2
M06673_2.00 		Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR
YGGCGGCKSHDNNDNNNNNNN		 Dap-seq
OMalley et al.(2016)
ERF2_colamp_a 		0.709 0.784
AT2G33710
M01613_2.00 		Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN		 PBM
Weirauch et al.(2014)
pTH7543 		0.698 0.725
AT2G33710
M06606_2.00 		Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH		 Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a 		0.698 0.725
AT2G33710
M06607_2.00 		Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN		 Dap-seq
OMalley et al.(2016)
At2g33710_col 		0.698 0.725
Q2TN80_WHEAT
M09715_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_02 		0.698 0.627
ERF086
M06663_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYHD
HDRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
PUCHI_col_a 		0.693 0.647
ERF086
M06664_2.00 		Arabidopsis thaliana
NNNNHDHCKCCGCCGYHDHHDHNNN
NNNDHDDHDRCGGCGGMGDHDNNNN		 Dap-seq
OMalley et al.(2016)
PUCHI_colamp_a 		0.693 0.647
Q84J59_MAIZE
M09717_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BD1_01 		0.693 0.627
Q5Y836_TOBAC
M09732_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF5_02 		0.691 0.706
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.691 0.686
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.691 0.686
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.691 0.686
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.691 0.686
ERF098
M01618_2.00 		Arabidopsis thaliana
NNGCCGNC
GNCGGCNN		 PBM
Weirauch et al.(2014)
pTH8259 		0.689 0.706
ERF4_TOBAC
M09728_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_02 		0.688 0.686
Q7Y1W2_TOBAC
M09735_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CEF1_01 		0.687 0.667
LEP
M06661_2.00 		Arabidopsis thaliana
NBCKCCGCCGYHDHHDYHNHH
DDNDRHDDHDRCGGCGGMGVN		 Dap-seq
OMalley et al.(2016)
LEP_col_a 		0.682 0.647
ERF091
M06638_2.00 		Arabidopsis thaliana
NNHNYHDCCGCCGCCRY
RYGGCGGCGGHDRNDNN		 Dap-seq
OMalley et al.(2016)
AT4G18450_col_a 		0.680 0.725
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_16s0013g01110.t01 AP2 81 133

Links

Other AP2 family TFs
Other Vitis vinifera TFs

1484 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28281.m000379 Ricinus communis 28281.m000379 I
29889.m003372 Ricinus communis 29889.m003372 I
AMTR_s00038p00173360 Amborella trichopoda AMTR_s00038p00173360 I
AMTR_s00045p00052450 Amborella trichopoda AMTR_s00045p00052450 I
Aquca_003_00380 Aquilegia coerulea Aquca_003_00380 I
Aquca_008_00132 Aquilegia coerulea Aquca_008_00132 I
Aquca_010_00201 Aquilegia coerulea Aquca_010_00201 I
CMTA3 Arabidopsis thaliana AT2G22300 D
EICBP.B Arabidopsis thaliana AT5G09410 D
CMTA2 Arabidopsis thaliana AT5G64220 D
BGIOSGA011302 Oryza indica BGIOSGA011302 I
BGIOSGA012779 Oryza indica BGIOSGA012779 I
BGIOSGA023886 Oryza indica BGIOSGA023886 I
BGIOSGA032809 Oryza indica BGIOSGA032809 I
Bo4g149510 Brassica oleracea Bo4g149510 I
Bo9g018010 Brassica oleracea Bo9g018010 I
Bo9g174050 Brassica oleracea Bo9g174050 I
Bostr.0568s0382 Boechera stricta Bostr.0568s0382 I
Bostr.13129s0055 Boechera stricta Bostr.13129s0055 I
Bostr.5022s0003 Boechera stricta Bostr.5022s0003 I
Bra009382 Brassica rapa Bra009382 I
Bra030248 Brassica rapa Bra030248 I
Bra037769 Brassica rapa Bra037769 I
Bra038534 Brassica rapa Bra038534 I
BRADI1G21372 Brachypodium distachyon BRADI1G21372 I
BRADI1G60817 Brachypodium distachyon BRADI1G60817 I
BRADI1G71810 Brachypodium distachyon BRADI1G71810 I
BRADI3G23800 Brachypodium distachyon BRADI3G23800 I
Cagra.0248s0103 Capsella grandiflora Cagra.0248s0103 I
Cagra.1365s0113 Capsella grandiflora Cagra.1365s0113 I
Cagra.2300s0004 Capsella grandiflora Cagra.2300s0004 I
Carubv10000120m.g Capsella rubella Carubv10000120m.g I
Carubv10024738m.g Capsella rubella Carubv10024738m.g I
Carubv10025787m.g Capsella rubella Carubv10025787m.g I
cassava1518.valid.m1 Manihot esculenta cassava1518.valid.m1 I
Ca_05255 Cicer arietinum Ca_05255 I
chr4.CM0182.510.nc Lotus japonicus chr4.CM0182.510.nc I
chr4.LjT13D08.100.nd Lotus japonicus chr4.LjT13D08.100.nd I
chr6.CM0314.100.nd Lotus japonicus chr6.CM0314.100.nd I
Ciclev10004234m.g Citrus clementina Ciclev10004234m.g I
Ciclev10024764m.g Citrus clementina Ciclev10024764m.g I
Cla013051 Citrullus lanatus Cla013051 I
Cla018421 Citrullus lanatus Cla018421 I
Cucsa.217940 Cucumis sativus Cucsa.217940 I
Eucgr.H04783 Eucalyptus grandis Eucgr.H04783 I
Eucgr.I02632 Eucalyptus grandis Eucgr.I02632 I
Eucgr.I02662 Eucalyptus grandis Eucgr.I02662 I
evm.TU.supercontig_213.9 Carica papaya evm.TU.supercontig_213.9 I
F775_11311 Aegilops tauschii F775_11311 I
F775_29292 Aegilops tauschii F775_29292 I
CAMTA3 Arabidopsis lyrata fgenesh2_kg.4__153__AT2G22300.2 I
EICBP.B Arabidopsis lyrata fgenesh2_kg.6__888__AT5G09410.2 I
gene29100-v1.0-hybrid Fragaria vesca gene29100-v1.0-hybrid I
GLYMA05G24430 Glycine max GLYMA05G24430 I
GLYMA05G31190 Glycine max GLYMA05G31190 I
GLYMA08G07680 Glycine max GLYMA08G07680 I
GLYMA08G14370 Glycine max GLYMA08G14370 I
GLYMA08G19101 Glycine max GLYMA08G19101 I
GLYMA15G05900 Glycine max GLYMA15G05900 I
GLYMA17G04310 Glycine max GLYMA17G04310 I
Gorai.005G220600 Gossypium raimondii Gorai.005G220600 I
Gorai.008G089900 Gossypium raimondii Gorai.008G089900 I
Gorai.011G204700 Gossypium raimondii Gorai.011G204700 I
Gorai.013G061100 Gossypium raimondii Gorai.013G061100 I
GRMZM2G341747 Zea mays GRMZM2G341747 I
GRMZM2G447551 Zea mays GRMZM2G447551 I
GSMUA_Achr1G21540_001 Musa acuminata GSMUA_Achr1G21540_001 I
GSMUA_Achr3G08460_001 Musa acuminata GSMUA_Achr3G08460_001 I
GSMUA_Achr3G21310_001 Musa acuminata GSMUA_Achr3G21310_001 I
GSMUA_Achr6G10390_001 Musa acuminata GSMUA_Achr6G10390_001 I
GSMUA_AchrUn_randomG02100_001 Musa acuminata GSMUA_AchrUn_randomG02100_001 I
GSMUA_AchrUn_randomG08930_001 Musa acuminata GSMUA_AchrUn_randomG08930_001 I
gw1.188.72.1 Physcomitrella patens gw1.188.72.1 I
LPERR03G05920 Leersia perrieri LPERR03G05920 I
LPERR03G17060 Leersia perrieri LPERR03G17060 I
LPERR07G19680 Leersia perrieri LPERR07G19680 I
LPERR10G05550 Leersia perrieri LPERR10G05550 I
Lus10003405.g Linum usitatissimum Lus10003405.g I
Lus10041704.g Linum usitatissimum Lus10041704.g I
MDP0000139862 Malus domestica MDP0000139862 I
MDP0000290409 Malus domestica MDP0000290409 I
mgf010601m Mimulus guttatus mgf010601m I
mgf015897m Mimulus guttatus mgf015897m I
mgf024932m Mimulus guttatus mgf024932m I
MLOC_38704 Hordeum vulgare MLOC_38704 I
MLOC_63299 Hordeum vulgare MLOC_63299 I
MTR_2g008840 Medicago truncatula MTR_2g008840 I
MTR_4g094215 Medicago truncatula MTR_4g094215 I
MTR_8g090205 Medicago truncatula MTR_8g090205 I
OB03G16740 Oryza brachyantha OB03G16740 I
OB03G29080 Oryza brachyantha OB03G29080 I
OB07G28190 Oryza brachyantha OB07G28190 I
OB10G16130 Oryza brachyantha OB10G16130 I
OBART03G06570 Oryza barthii OBART03G06570 I
OBART03G19880 Oryza barthii OBART03G19880 I
OBART07G22710 Oryza barthii OBART07G22710 I
OBART10G08060 Oryza barthii OBART10G08060 I
OGLUM03G06680 Oryza glumaepatula OGLUM03G06680 I
OGLUM03G20490 Oryza glumaepatula OGLUM03G20490 I
OGLUM07G22660 Oryza glumaepatula OGLUM07G22660 I
OGLUM10G07770 Oryza glumaepatula OGLUM10G07770 I
OLONG_001033 Oryza longistaminata OLONG_001033 I
OLONG_003971 Oryza longistaminata OLONG_003971 I
OLONG_018130 Oryza longistaminata OLONG_018130 I
OLONG_019207 Oryza longistaminata OLONG_019207 I
OMERI03G06500 Oryza meridionalis OMERI03G06500 I
OMERI03G17850 Oryza meridionalis OMERI03G17850 I
ONIVA02G06230 Oryza nivara ONIVA02G06230 I
ONIVA03G21570 Oryza nivara ONIVA03G21570 I
ONIVA07G22160 Oryza nivara ONIVA07G22160 I
ONIVA10G07200 Oryza nivara ONIVA10G07200 I
ONIVA10G07730 Oryza nivara ONIVA10G07730 I
OPUNC03G18730 Oryza punctata OPUNC03G18730 I
OPUNC07G21310 Oryza punctata OPUNC07G21310 I
OPUNC10G06950 Oryza punctata OPUNC10G06950 I
orange1.1g001365m.g Citrus sinensis orange1.1g001365m.g I
orange1.1g001406m.g Citrus sinensis orange1.1g001406m.g I
orange1.1g001759m.g Citrus sinensis orange1.1g001759m.g I
ORGLA03G0064000 Oryza glaberrima ORGLA03G0064000 I
ORGLA07G0175700 Oryza glaberrima ORGLA07G0175700 I
ORGLA10G0066800 Oryza glaberrima ORGLA10G0066800 I
ORGLA10G0167300 Oryza glaberrima ORGLA10G0167300 I
ORUFI03G06510 Oryza rufipogon ORUFI03G06510 I
ORUFI03G20520 Oryza rufipogon ORUFI03G20520 I
ORUFI07G23760 Oryza rufipogon ORUFI07G23760 I
ORUFI10G08490 Oryza rufipogon ORUFI10G08490 I
OS03G0191000 Oryza sativa OS03G0191000 I
OS10G0375600 Oryza sativa OS10G0375600 I
Pavir.Ba00386 Panicum virgatum Pavir.Ba00386 I
Pavir.Ia02749 Panicum virgatum Pavir.Ia02749 I
Pavir.Ia03131 Panicum virgatum Pavir.Ia03131 I
Pavir.Ib02991 Panicum virgatum Pavir.Ib02991 I
Pavir.J35200 Panicum virgatum Pavir.J35200 I
Pavir.J38535 Panicum virgatum Pavir.J38535 I
PK04004.1 Cannabis sativa PK04004.1 I
PK28233.1 Cannabis sativa PK28233.1 I
Pm002007 Prunus mume Pm002007 I
Pm008450 Prunus mume Pm008450 I
POPTR_0005s07660 Populus trichocarpa POPTR_0005s07660 I
POPTR_0007s05410 Populus trichocarpa POPTR_0007s05410 I
SapurV1A.0039s0030 Salix purpurea SapurV1A.0039s0030 I
SapurV1A.0072s0470 Salix purpurea SapurV1A.0072s0470 I
SapurV1A.0403s0170 Salix purpurea SapurV1A.0403s0170 I
Sb0012s010230 Sorghum bicolor Sb0012s010230 I
Sb01g033650 Sorghum bicolor Sb01g033650 I
Sb01g044480 Sorghum bicolor Sb01g044480 I
Sb02g039710 Sorghum bicolor Sb02g039710 I
scaffold_803130.1 Arabidopsis lyrata scaffold_803130.1 I
SELMODRAFT_413101 Selaginella moellendorffii SELMODRAFT_413101 I
SELMODRAFT_441667 Selaginella moellendorffii SELMODRAFT_441667 I
Si028797m.g Setaria italica Si028797m.g I
Si034046m.g Setaria italica Si034046m.g I
Si034054m.g Setaria italica Si034054m.g I
Si034076m.g Setaria italica Si034076m.g I
Solyc01g105230.2 Solanum lycopersicum Solyc01g105230.2 I
Solyc04g056270.2 Solanum lycopersicum Solyc04g056270.2 I
TCM_001108 Theobroma cacao TCM_001108 I
TCM_007482 Theobroma cacao TCM_007482 I
TCM_021468 Theobroma cacao TCM_021468 I
Thhalv10000026m.g Eutrema salsugineum Thhalv10000026m.g I
Thhalv10003564m.g Eutrema salsugineum Thhalv10003564m.g I
Thhalv10012552m.g Eutrema salsugineum Thhalv10012552m.g I
Traes_2AS_506D953C1 Triticum aestivum Traes_2AS_506D953C1 I
Traes_2DS_D05DC56BD Triticum aestivum Traes_2DS_D05DC56BD I
Traes_4AL_2F7E6536A Triticum aestivum Traes_4AL_2F7E6536A I
Traes_4DL_C2F35966E Triticum aestivum Traes_4DL_C2F35966E I
Traes_5BL_92902F993 Triticum aestivum Traes_5BL_92902F993 I
TRIUR3_23040 Triticum urartu TRIUR3_23040 I
TRIUR3_23792 Triticum urartu TRIUR3_23792 I
VIT_05s0020g00630 Vitis vinifera VIT_05s0020g00630 I