gw1.133.82.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gw1.133.82.1 T007260_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_gwp_gw1.C_550163
M01640_2.00 		Physcomitrella patens
NCACCGACHN
NDGTCGGTGN		 PBM
Weirauch et al.(2014)
pTH8472 		0.790 0.958
estExt_fgenesh1_pg.C_4800009
M01639_2.00 		Physcomitrella patens
MACCGACM
KGTCGGTK		 PBM
Weirauch et al.(2014)
pTH8488 		0.757 0.938
gw1.8.141.1
M01642_2.00 		Physcomitrella patens
CACCGACM
KGTCGGTG		 PBM
Weirauch et al.(2014)
pTH8456 		0.704 0.896
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.133.82.1 AP2 1 50

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CMQ_5822 Grosmannia clavigera CMQ_5822 N
CSUB01_03529 Colletotrichum sublineola CSUB01_03529 N
CTHT_0018600 Chaetomium thermophilum CTHT_0018600 N
e_gw1.44.63.1 Nectria haematococca e_gw1.44.63.1 N
FFUJ_12033 Fusarium fujikuroi FFUJ_12033 N
FOXG_11942 Fusarium oxysporum FOXG_11942 N
GLRG_04471 Colletotrichum graminicola GLRG_04471 N
HMPREF1624_04294 Sporothrix schenckii HMPREF1624_04294 N
MAJ_03766 Metarhizium majus MAJ_03766 N
MGU_03432 Metarhizium guizhouense MGU_03432 N
MYCTH_2308290 Myceliophthora thermophila MYCTH_2308290 N
NechaG35029 Fusarium solani NechaG35029 N
Pc13g04540 Penicillium chrysogenum Pc13g04540 N
PCH_Pc13g04540 Penicillium rubens PCH_Pc13g04540 N
PODANS_5_13000 Podospora anserina PODANS_5_13000 N
SPBR_05599 Sporothrix brasiliensis SPBR_05599 N
THITE_2051426 Thielavia terrestris THITE_2051426 N
U727_00430040361 Penicillium solitum U727_00430040361 N
X797_003553 Metarhizium robertsii X797_003553 N