CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_013_00679
(
Aquilegia coerulea
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Aquca_013_00679
T007490_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH
DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.715
0.878
Q1ESI9_MAIZE
M09714_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB2A_02
0.704
0.816
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_013_00679.1
AP2
69
120
CNYRGVRQRTWGKWVAEIREPNRGRRLWLGTFTTAVDAALAYDAAARAMYGS
Aquca_013_00679.2
AP2
69
120
CNYRGVRQRTWGKWVAEIREPNRGRRLWLGTFTTAVDAALAYDAAARAMYGS
Aquca_013_00679.3
AP2
69
120
CNYRGVRQRTWGKWVAEIREPNRGRRLWLGTFTTAVDAALAYDAAARAMYGS
Links
Other
AP2
family TFs
Other
Aquilegia coerulea
TFs
105 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L889_g16965
Steinernema feltiae
L889_g16965
N
0.000
L898_g14382
Steinernema monticolum
L898_g14382
N
0.000
nDi.2.2.2.g12300
Dirofilaria immitis
nDi.2.2.2.g12300
I
0.000