CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_013_00679
(
Aquilegia coerulea
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Aquca_013_00679
T007490_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH
DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.715
0.878
Q1ESI9_MAIZE
M09714_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB2A_02
0.704
0.816
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_013_00679.1
AP2
69
120
CNYRGVRQRTWGKWVAEIREPNRGRRLWLGTFTTAVDAALAYDAAARAMYGS
Aquca_013_00679.2
AP2
69
120
CNYRGVRQRTWGKWVAEIREPNRGRRLWLGTFTTAVDAALAYDAAARAMYGS
Aquca_013_00679.3
AP2
69
120
CNYRGVRQRTWGKWVAEIREPNRGRRLWLGTFTTAVDAALAYDAAARAMYGS
Links
Other
AP2
family TFs
Other
Aquilegia coerulea
TFs
105 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_030_00214
Aquilegia coerulea
Aquca_030_00214
I
0.772
gene21047-v1.0-hybrid
Fragaria vesca
gene21047-v1.0-hybrid
I
0.756
MDP0000165880
Malus domestica
MDP0000165880
I
0.755
MDP0000147009
Malus domestica
MDP0000147009
I
0.750
MDP0000446783
Malus domestica
MDP0000446783
I
0.750
PRUPE_ppa007606mg
Prunus persica
PRUPE_ppa007606mg
I
0.748
Pm018989
Prunus mume
Pm018989
I
0.748
F775_02345
Aegilops tauschii
F775_02345
I
0.730
MLOC_66580
Hordeum vulgare
MLOC_66580
I
0.730
Si024059m.g
Setaria italica
Si024059m.g
I
0.730
Traes_2DL_B32203C91
Triticum aestivum
Traes_2DL_B32203C91
I
0.730
Pavir.J22169
Panicum virgatum
Pavir.J22169
I
0.730
Pavir.J25464
Panicum virgatum
Pavir.J25464
I
0.730
MLOC_12223
Hordeum vulgare
MLOC_12223
I
0.728
Cla001755
Citrullus lanatus
Cla001755
I
0.728
Cucsa.119440
Cucumis sativus
Cucsa.119440
I
0.728
TCM_026121
Theobroma cacao
TCM_026121
I
0.725
BGIOSGA026461
Oryza indica
BGIOSGA026461
I
0.724
BGIOSGA026464
Oryza indica
BGIOSGA026464
I
0.724
OB08G30790
Oryza brachyantha
OB08G30790
I
0.724
OGLUM08G25470
Oryza glumaepatula
OGLUM08G25470
I
0.724
OMERI08G18820
Oryza meridionalis
OMERI08G18820
I
0.724
ONIVA09G01190
Oryza nivara
ONIVA09G01190
I
0.724
OPUNC08G21890
Oryza punctata
OPUNC08G21890
I
0.724
ORGLA08G0193700
Oryza glaberrima
ORGLA08G0193700
I
0.724
ORUFI08G26490
Oryza rufipogon
ORUFI08G26490
I
0.724
DREB2C
Oryza sativa
OS08G0565200
I
0.724
Traes_2BL_B397F2CE3
Triticum aestivum
Traes_2BL_B397F2CE3
I
0.724
Bostr.23794s0027
Boechera stricta
Bostr.23794s0027
I
0.721
LPERR08G12790
Leersia perrieri
LPERR08G12790
I
0.720
BRADI3G12680
Brachypodium distachyon
BRADI3G12680
I
0.717
chr1.CM0195.510.nd
Lotus japonicus
chr1.CM0195.510.nd
I
0.717
F775_01779
Aegilops tauschii
F775_01779
I
0.716
Eucgr.K02952
Eucalyptus grandis
Eucgr.K02952
I
0.715
PK07402.1
Cannabis sativa
PK07402.1
D
0.715
Lus10006127.g
Linum usitatissimum
Lus10006127.g
I
0.712
Lus10024298.g
Linum usitatissimum
Lus10024298.g
I
0.712
PGSC0003DMG400027117
Solanum tuberosum
PGSC0003DMG400027117
I
0.711
Solyc05g052410.1
Solanum lycopersicum
Solyc05g052410.1
I
0.711
Traes_2AL_3FB37A3E7
Triticum aestivum
Traes_2AL_3FB37A3E7
I
0.711
POPTR_0008s07360
Populus trichocarpa
POPTR_0008s07360
I
0.710
Eucgr.F01607
Eucalyptus grandis
Eucgr.F01607
I
0.710
PK16401.1
Cannabis sativa
PK16401.1
N
0.710
LPERR08G20650
Leersia perrieri
LPERR08G20650
I
0.709
cassava19475.valid.m1
Manihot esculenta
cassava19475.valid.m1
I
0.709
evm.TU.supercontig_19.121
Carica papaya
evm.TU.supercontig_19.121
I
0.709
SapurV1A.0673s0120
Salix purpurea
SapurV1A.0673s0120
I
0.709
SapurV1A.1420s0050
Salix purpurea
SapurV1A.1420s0050
I
0.709
F775_32062
Aegilops tauschii
F775_32062
I
0.708
Sb09g016150
Sorghum bicolor
Sb09g016150
I
0.708
Si022619m.g
Setaria italica
Si022619m.g
I
0.708
Traes_1AL_A9FB6BF52
Triticum aestivum
Traes_1AL_A9FB6BF52
I
0.708
Traes_1BL_BDF0801D01
Triticum aestivum
Traes_1BL_BDF0801D01
I
0.708
TRIUR3_17409
Triticum urartu
TRIUR3_17409
I
0.708
Cucsa.136780
Cucumis sativus
Cucsa.136780
I
0.708
Pavir.Ca01725
Panicum virgatum
Pavir.Ca01725
I
0.708
Pavir.Cb01298
Panicum virgatum
Pavir.Cb01298
I
0.708
POPTR_0010s19100
Populus trichocarpa
POPTR_0010s19100
I
0.707
PRUPE_ppa022996mg
Prunus persica
PRUPE_ppa022996mg
I
0.707
Cla006713
Citrullus lanatus
Cla006713
I
0.707
Lus10010632.g
Linum usitatissimum
Lus10010632.g
I
0.706
SapurV1A.1286s0030
Salix purpurea
SapurV1A.1286s0030
I
0.705
SapurV1A.2268s0010
Salix purpurea
SapurV1A.2268s0010
I
0.705
GRMZM2G006745
Zea mays
GRMZM2G006745
I
0.704
Q1ESI9_MAIZE
Zea mays
Q1ESI9_MAIZE
D
0.704
VIT_13s0067g01960
Vitis vinifera
VIT_13s0067g01960
I
0.704
Cla022803
Citrullus lanatus
Cla022803
I
0.704
Cucsa.231820
Cucumis sativus
Cucsa.231820
I
0.704
TRIUR3_03342
Triticum urartu
TRIUR3_03342
N
0.703
SELMODRAFT_38498
Selaginella moellendorffii
SELMODRAFT_38498
N
0.702
SELMODRAFT_38500
Selaginella moellendorffii
SELMODRAFT_38500
N
0.702
GLYMA06G45680
Glycine max
GLYMA06G45680
I
0.700
GSMUA_Achr9G04630_001
Musa acuminata
GSMUA_Achr9G04630_001
I
0.700
29729.m002292
Ricinus communis
29729.m002292
I
0.699
Ciclev10022244m.g
Citrus clementina
Ciclev10022244m.g
I
0.696
Ca_14133
Cicer arietinum
Ca_14133
I
0.695
GSMUA_Achr11G24820_001
Musa acuminata
GSMUA_Achr11G24820_001
I
0.694
Pm003634
Prunus mume
Pm003634
I
0.694
GSMUA_AchrUn_randomG14580_001
Musa acuminata
GSMUA_AchrUn_randomG14580_001
I
0.693
gene01985-v1.0-hybrid
Fragaria vesca
gene01985-v1.0-hybrid
I
0.692
GLYMA12G32400
Glycine max
GLYMA12G32400
I
0.691
GLYMA13G38030
Glycine max
GLYMA13G38030
I
0.691
MTR_7g070220
Medicago truncatula
MTR_7g070220
I
0.690
Ciclev10032029m.g
Citrus clementina
Ciclev10032029m.g
I
0.689
Lus10012226.g
Linum usitatissimum
Lus10012226.g
I
0.689
orange1.1g019546m.g
Citrus sinensis
orange1.1g019546m.g
I
0.689
Gorai.007G271900
Gossypium raimondii
Gorai.007G271900
I
0.688
Eucgr.G03094
Eucalyptus grandis
Eucgr.G03094
I
0.687
PRUPE_ppa022733mg
Prunus persica
PRUPE_ppa022733mg
I
0.686
Pm015262
Prunus mume
Pm015262
I
0.686
LPERR01G03760
Leersia perrieri
LPERR01G03760
I
0.685
PDK_20s1493381g003
Phoenix dactylifera
PDK_20s1493381g003
I
0.685
Ca_12446
Cicer arietinum
Ca_12446
I
0.683
MTR_5g083340
Medicago truncatula
MTR_5g083340
I
0.682
PRUPE_ppa026176mg
Prunus persica
PRUPE_ppa026176mg
I
0.682
MDP0000290585
Malus domestica
MDP0000290585
I
0.682
MTR_0939s0010
Medicago truncatula
MTR_0939s0010
I
0.681
MTR_2g089170
Medicago truncatula
MTR_2g089170
N
0.681
Pavir.J01802
Panicum virgatum
Pavir.J01802
N
0.681
GSMUA_Achr5G28050_001
Musa acuminata
GSMUA_Achr5G28050_001
I
0.680
MDP0000250927
Malus domestica
MDP0000250927
I
0.680
Thhalv10016913m.g
Eutrema salsugineum
Thhalv10016913m.g
I
0.680
PGSC0003DMG400028700
Solanum tuberosum
PGSC0003DMG400028700
I
0.677
Solyc04g050750.1
Solanum lycopersicum
Solyc04g050750.1
I
0.677