Cla022803 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla022803 T006535_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.737 0.898
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.737 0.898
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.737 0.898
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.684 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla022803 AP2 12 63

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.821
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.791
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.791
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.783
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I 0.783
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I 0.774
Pm006274 Prunus mume Pm006274 I 0.752
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.752
Cla021113 Citrullus lanatus Cla021113 I 0.749
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.749
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.749
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.747
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.744
30170.m014115 Ricinus communis 30170.m014115 I 0.744
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.744
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.744
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.744
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.743
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.743
Bo2g083920 Brassica oleracea Bo2g083920 I 0.742
Bra008200 Brassica rapa Bra008200 I 0.742
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I 0.741
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.740
MDP0000250924 Malus domestica MDP0000250924 I 0.740
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.739
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.739
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.739
TCM_034132 Theobroma cacao TCM_034132 I 0.739
Ca_10770 Cicer arietinum Ca_10770 I 0.739
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.739
DREB2D Arabidopsis thaliana AT1G75490 D 0.737
Bo6g119660 Brassica oleracea Bo6g119660 I 0.737
Bra015840 Brassica rapa Bra015840 I 0.737
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.737
mgf024545m Mimulus guttatus mgf024545m I 0.737
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.737
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.737
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.737
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.737
PGSC0003DMG400003706 Solanum tuberosum PGSC0003DMG400003706 I 0.734
Solyc04g080910.1 Solanum lycopersicum Solyc04g080910.1 I 0.734
TCM_026121 Theobroma cacao TCM_026121 I 0.734
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.733
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.732
MDP0000141335 Malus domestica MDP0000141335 I 0.732
MDP0000295902 Malus domestica MDP0000295902 I 0.732
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.731
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.731
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.731
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.725
Bo6g086320 Brassica oleracea Bo6g086320 I 0.724
Bra003752 Brassica rapa Bra003752 I 0.724
BGIOSGA026461 Oryza indica BGIOSGA026461 I 0.719
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.719
OB08G30790 Oryza brachyantha OB08G30790 I 0.719
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I 0.719
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.719
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.719
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.719
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.719
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I 0.719
DREB2C Oryza sativa OS08G0565200 I 0.719
LPERR08G12790 Leersia perrieri LPERR08G12790 I 0.714
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.714
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.712
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.712
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I 0.709
MDP0000250927 Malus domestica MDP0000250927 I 0.708
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I 0.705
LPERR08G20650 Leersia perrieri LPERR08G20650 I 0.704
mgf017629m Mimulus guttatus mgf017629m I 0.704
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.704
F775_02345 Aegilops tauschii F775_02345 I 0.702
MLOC_66580 Hordeum vulgare MLOC_66580 I 0.702
Si024059m.g Setaria italica Si024059m.g I 0.702
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I 0.702
Pavir.J22169 Panicum virgatum Pavir.J22169 I 0.702
Pavir.J25464 Panicum virgatum Pavir.J25464 I 0.702
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.700
MLOC_12223 Hordeum vulgare MLOC_12223 I 0.700
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.700
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.700
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.699
MDP0000147009 Malus domestica MDP0000147009 I 0.699
MDP0000446783 Malus domestica MDP0000446783 I 0.699
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.698
MDP0000165880 Malus domestica MDP0000165880 I 0.698
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.697
Pm018989 Prunus mume Pm018989 I 0.697
Pm003634 Prunus mume Pm003634 I 0.693
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.692
cassava25887.m1 Manihot esculenta cassava25887.m1 I 0.689
F775_01779 Aegilops tauschii F775_01779 I 0.688
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.687
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.686
29680.m001737 Ricinus communis 29680.m001737 I 0.686
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.685
DREB2G Arabidopsis thaliana AT5G18450 D 0.684
Bo9g155940 Brassica oleracea Bo9g155940 I 0.684
Bra002159 Brassica rapa Bra002159 I 0.684
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.684
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.684
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.684
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.683
Traes_2AL_3FB37A3E7 Triticum aestivum Traes_2AL_3FB37A3E7 I 0.682
F775_32062 Aegilops tauschii F775_32062 I 0.681
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.681
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.681
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.681
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.681
SELMODRAFT_38498 Selaginella moellendorffii SELMODRAFT_38498 N 0.680
SELMODRAFT_38500 Selaginella moellendorffii SELMODRAFT_38500 N 0.680
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.679
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.679
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.678
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.678