MTR_1g023170 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_1g023170 T002771_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.765 0.918
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.765 0.918
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.765 0.918
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.720 0.816
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.688 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES59595 AP2 38 89

Links

Other AP2 family TFs
Other Medicago truncatula TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.803
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.803
Ca_10770 Cicer arietinum Ca_10770 I 0.803
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.803
Pm006274 Prunus mume Pm006274 I 0.793
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.793
Cla021113 Citrullus lanatus Cla021113 I 0.790
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.790
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.790
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.788
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.785
30170.m014115 Ricinus communis 30170.m014115 I 0.785
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.785
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.785
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.785
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.784
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.783
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.781
MDP0000250924 Malus domestica MDP0000250924 I 0.781
TCM_034132 Theobroma cacao TCM_034132 I 0.780
mgf024545m Mimulus guttatus mgf024545m I 0.778
Bo6g086320 Brassica oleracea Bo6g086320 I 0.775
Bra003752 Brassica rapa Bra003752 I 0.775
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.774
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.773
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.772
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.771
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.771
Bo2g083920 Brassica oleracea Bo2g083920 I 0.770
Bra008200 Brassica rapa Bra008200 I 0.770
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I 0.769
MDP0000141335 Malus domestica MDP0000141335 I 0.766
MDP0000295902 Malus domestica MDP0000295902 I 0.766
DREB2D Arabidopsis thaliana AT1G75490 D 0.765
Bo6g119660 Brassica oleracea Bo6g119660 I 0.765
Bra015840 Brassica rapa Bra015840 I 0.765
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.765
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.765
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.765
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.765
MDP0000250927 Malus domestica MDP0000250927 I 0.765
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.765
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.754
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.754
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.753
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.745
Cla022803 Citrullus lanatus Cla022803 I 0.739
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.739
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I 0.737
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.735
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.735
MTR_3g112440 Medicago truncatula MTR_3g112440 I 0.733
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.733
Pm003634 Prunus mume Pm003634 I 0.729
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.728
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.728
cassava25887.m1 Manihot esculenta cassava25887.m1 I 0.725
mgf017629m Mimulus guttatus mgf017629m I 0.723
29680.m001737 Ricinus communis 29680.m001737 I 0.722
DREB2G Arabidopsis thaliana AT5G18450 D 0.720
Bo9g155940 Brassica oleracea Bo9g155940 I 0.720
Bra002159 Brassica rapa Bra002159 I 0.720
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.720
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.720
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.720
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.719
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.718
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.715
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.715
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.711
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.709
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.704
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.703
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.702
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.702
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.702
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.701
Bo2g016490 Brassica oleracea Bo2g016490 I 0.700
Bra023674 Brassica rapa Bra023674 I 0.700
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.700
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I 0.699
PGSC0003DMG400003706 Solanum tuberosum PGSC0003DMG400003706 I 0.697
Solyc04g080910.1 Solanum lycopersicum Solyc04g080910.1 I 0.697
MDP0000223609 Malus domestica MDP0000223609 I 0.697
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.696
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.696
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.696
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.696
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.696
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.696
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.696
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.696
TCM_026121 Theobroma cacao TCM_026121 I 0.695
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.695
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.694
Cla006713 Citrullus lanatus Cla006713 I 0.694
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.693
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.691
29729.m002292 Ricinus communis 29729.m002292 I 0.691
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.690
GRMZM2G028386 Zea mays GRMZM2G028386 I 0.689
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.689
PK07402.1 Cannabis sativa PK07402.1 D 0.688
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.687
MDP0000153866 Malus domestica MDP0000153866 I 0.687
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.687
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.684
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.683
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.682
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.681
Sb07g023575 Sorghum bicolor Sb07g023575 I 0.681
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.681
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.680
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.680
Bo3g013160 Brassica oleracea Bo3g013160 I 0.677
Bra006460 Brassica rapa Bra006460 I 0.677
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.677