MDP0000223609 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000223609 T009031_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.691 0.878
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.691 0.878
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.691 0.878
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000223609 AP2 45 96

Links

Other AP2 family TFs
Other Malus domestica TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000250924 Malus domestica MDP0000250924 I 0.721
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.713
Pm006274 Prunus mume Pm006274 I 0.710
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.710
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.708
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.708
Cla021113 Citrullus lanatus Cla021113 I 0.707
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.705
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.705
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.703
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.703
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.703
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.703
30170.m014115 Ricinus communis 30170.m014115 I 0.703
mgf024545m Mimulus guttatus mgf024545m I 0.701
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.701
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.700
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.699
TCM_034132 Theobroma cacao TCM_034132 I 0.698
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.697
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.697
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.697
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.697
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.697
Ca_10770 Cicer arietinum Ca_10770 I 0.697
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.697
Bo2g083920 Brassica oleracea Bo2g083920 I 0.696
Bra008200 Brassica rapa Bra008200 I 0.696
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.693
MDP0000141335 Malus domestica MDP0000141335 I 0.692
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.692
MDP0000295902 Malus domestica MDP0000295902 I 0.692
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.691
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.691
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.691
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.691
DREB2D Arabidopsis thaliana AT1G75490 D 0.691
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.691
Bra015840 Brassica rapa Bra015840 I 0.691
Bo6g119660 Brassica oleracea Bo6g119660 I 0.691
MDP0000250927 Malus domestica MDP0000250927 I 0.686
Bra003752 Brassica rapa Bra003752 I 0.678
Bo6g086320 Brassica oleracea Bo6g086320 I 0.678