Bo2g083920 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo2g083920 T000755_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.795 0.980
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.795 0.980
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.795 0.980
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.725 0.816
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.692 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo2g083920.1 AP2 31 82

Links

Other AP2 family TFs
Other Brassica oleracea TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra008200 Brassica rapa Bra008200 I 0.800
DREB2D Arabidopsis thaliana AT1G75490 D 0.795
Bo6g119660 Brassica oleracea Bo6g119660 I 0.795
Bra015840 Brassica rapa Bra015840 I 0.795
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.795
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.795
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.795
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.795
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.795
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.788
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.788
Pm006274 Prunus mume Pm006274 I 0.783
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.783
Bo6g086320 Brassica oleracea Bo6g086320 I 0.781
Bra003752 Brassica rapa Bra003752 I 0.781
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.781
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.781
Cla021113 Citrullus lanatus Cla021113 I 0.780
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.779
MDP0000250924 Malus domestica MDP0000250924 I 0.779
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.778
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.776
30170.m014115 Ricinus communis 30170.m014115 I 0.775
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.775
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.775
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.775
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.775
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.774
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.774
MDP0000141335 Malus domestica MDP0000141335 I 0.773
MDP0000295902 Malus domestica MDP0000295902 I 0.773
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.772
TCM_034132 Theobroma cacao TCM_034132 I 0.771
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.771
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.770
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.770
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.770
Ca_10770 Cicer arietinum Ca_10770 I 0.770
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.770
mgf024545m Mimulus guttatus mgf024545m I 0.768
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.764
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.755
MDP0000250927 Malus domestica MDP0000250927 I 0.751
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.745
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.745
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.742
Cla022803 Citrullus lanatus Cla022803 I 0.742
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.742
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I 0.737
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.736
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.736
Pm003634 Prunus mume Pm003634 I 0.736
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.732
mgf017629m Mimulus guttatus mgf017629m I 0.729
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.728
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.727
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I 0.727
DREB2G Arabidopsis thaliana AT5G18450 D 0.725
Bo9g155940 Brassica oleracea Bo9g155940 I 0.725
Bra002159 Brassica rapa Bra002159 I 0.725
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.725
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.725
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.725
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.725
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.720
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.720
MTR_3g112440 Medicago truncatula MTR_3g112440 I 0.718
cassava25887.m1 Manihot esculenta cassava25887.m1 I 0.714
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.713
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.712
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.712
29680.m001737 Ricinus communis 29680.m001737 I 0.711
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.706
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I 0.706
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.706
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.706
Bo2g016490 Brassica oleracea Bo2g016490 I 0.705
Bra023674 Brassica rapa Bra023674 I 0.705
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.704
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.701
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.700
TCM_026121 Theobroma cacao TCM_026121 I 0.699
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.698
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.698
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.697
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.697
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.697
Cla006713 Citrullus lanatus Cla006713 I 0.696
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.696
MDP0000223609 Malus domestica MDP0000223609 I 0.696
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.695
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.695
PGSC0003DMG400003706 Solanum tuberosum PGSC0003DMG400003706 I 0.695
Solyc04g080910.1 Solanum lycopersicum Solyc04g080910.1 I 0.695
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.695
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.694
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.694
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.694
Sb07g023575 Sorghum bicolor Sb07g023575 I 0.693
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.692
PK07402.1 Cannabis sativa PK07402.1 D 0.692
GRMZM2G028386 Zea mays GRMZM2G028386 I 0.688
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.688
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.688
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.686
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.685
29729.m002292 Ricinus communis 29729.m002292 I 0.685
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.685
BGIOSGA026461 Oryza indica BGIOSGA026461 I 0.683
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.683
OB08G30790 Oryza brachyantha OB08G30790 I 0.683
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I 0.683
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.683
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.683
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.683
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.683
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I 0.683
DREB2C Oryza sativa OS08G0565200 I 0.683
Bo3g013160 Brassica oleracea Bo3g013160 I 0.682
Bra006460 Brassica rapa Bra006460 I 0.682
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.682
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.681
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.681
MDP0000153866 Malus domestica MDP0000153866 I 0.681
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.681
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.679
LPERR08G12790 Leersia perrieri LPERR08G12790 I 0.678
Lus10003581.g Linum usitatissimum Lus10003581.g I 0.678
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.677