MTR_5g083330 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_5g083330 T002898_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.731 0.800
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.704 0.760
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.686 0.740
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.686 0.740
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.686 0.740
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES99658 AP2 33 84

Links

Other AP2 family TFs
Other Medicago truncatula TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.780
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.780
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.766
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.750
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.743
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.739
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.735
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.735
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.733
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.731
PK07402.1 Cannabis sativa PK07402.1 D 0.731
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.730
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.730
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.729
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.729
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.729
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.727
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.726
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.725
Cla006713 Citrullus lanatus Cla006713 I 0.724
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.721
29729.m002292 Ricinus communis 29729.m002292 I 0.717
TCM_043302 Theobroma cacao TCM_043302 I 0.716
TCM_043306 Theobroma cacao TCM_043306 I 0.716
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.714
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.714
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.714
MDP0000153866 Malus domestica MDP0000153866 I 0.713
SapurV1A.0001s0300 Salix purpurea SapurV1A.0001s0300 I 0.713
PK07829.1 Cannabis sativa PK07829.1 I 0.713
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.711
Gorai.011G235900 Gossypium raimondii Gorai.011G235900 I 0.711
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.711
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.710
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.709
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.707
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.706
F775_05774 Aegilops tauschii F775_05774 I 0.704
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.704
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.704
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.704
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.704
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.704
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.701
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.701
Pm015262 Prunus mume Pm015262 I 0.701
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.701
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.700
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.700
MDP0000147009 Malus domestica MDP0000147009 I 0.700
MDP0000290585 Malus domestica MDP0000290585 I 0.700
MDP0000446783 Malus domestica MDP0000446783 I 0.700
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.698
OB01G13930 Oryza brachyantha OB01G13930 I 0.698
OBART01G04210 Oryza barthii OBART01G04210 I 0.698
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.698
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.698
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.698
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.698
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.698
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.698
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.698
DREB2A Oryza sativa OS01G0165000 I 0.698
Aquca_004_00452 Aquilegia coerulea Aquca_004_00452 I 0.698
Bo2g016490 Brassica oleracea Bo2g016490 I 0.696
Bra023674 Brassica rapa Bra023674 I 0.696
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.696
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.696
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.695
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.694
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.694
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.694
Pm018989 Prunus mume Pm018989 I 0.694
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.694
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.694
MDP0000165880 Malus domestica MDP0000165880 I 0.694
Bo4g190040 Brassica oleracea Bo4g190040 I 0.691
Bra017011 Brassica rapa Bra017011 I 0.691
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.691
Si002067m.g Setaria italica Si002067m.g I 0.690
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.690
Si022619m.g Setaria italica Si022619m.g I 0.689
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.689
Bo2g083920 Brassica oleracea Bo2g083920 I 0.688
Bra008200 Brassica rapa Bra008200 I 0.688
Pm003634 Prunus mume Pm003634 I 0.688
MDP0000880312 Malus domestica MDP0000880312 I 0.687
DREB2D Arabidopsis thaliana AT1G75490 D 0.686
Bo6g086320 Brassica oleracea Bo6g086320 I 0.686
Bo6g119660 Brassica oleracea Bo6g119660 I 0.686
Bra003752 Brassica rapa Bra003752 I 0.686
Bra015840 Brassica rapa Bra015840 I 0.686
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.686
Traes_2AL_3FB37A3E7 Triticum aestivum Traes_2AL_3FB37A3E7 I 0.686
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.686
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.686
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.686
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.686
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.685
Bo9g177130 Brassica oleracea Bo9g177130 I 0.684
Lus10002855.g Linum usitatissimum Lus10002855.g N 0.684
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.683
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.683
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.682
TCM_043275 Theobroma cacao TCM_043275 I 0.682
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.680
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.680
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.680
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.680
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.680
Ca_10770 Cicer arietinum Ca_10770 I 0.680
Ca_12446 Cicer arietinum Ca_12446 I 0.680
Pm006274 Prunus mume Pm006274 I 0.680
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.680
mgf024545m Mimulus guttatus mgf024545m I 0.680
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.680
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.680
F775_32062 Aegilops tauschii F775_32062 I 0.679
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.679
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.679
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.679
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.679
Cla021113 Citrullus lanatus Cla021113 I 0.679
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.678
MDP0000250924 Malus domestica MDP0000250924 I 0.678
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.677
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.677
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.677
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.677