MDP0000165880 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000165880 T008988_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.747 0.898
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.744 0.857
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.695 0.837
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.689 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000165880 AP2 79 130

Links

Other AP2 family TFs
Other Malus domestica TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.812
Pm018989 Prunus mume Pm018989 I 0.807
MDP0000147009 Malus domestica MDP0000147009 I 0.807
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.807
MDP0000446783 Malus domestica MDP0000446783 I 0.807
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.784
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.769
Cla001755 Citrullus lanatus Cla001755 I 0.765
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.765
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.755
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.748
Cla006713 Citrullus lanatus Cla006713 I 0.747
PK07402.1 Cannabis sativa PK07402.1 D 0.747
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.746
29729.m002292 Ricinus communis 29729.m002292 I 0.746
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.745
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.744
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.744
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.744
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.744
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.744
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.744
F775_32062 Aegilops tauschii F775_32062 I 0.744
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.742
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.742
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.741
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.739
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.739
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.737
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.736
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.736
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.736
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.735
Si022619m.g Setaria italica Si022619m.g I 0.735
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.733
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I 0.729
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.729
GLYMA12G11150 Glycine max GLYMA12G11150 I 0.726
TCM_026121 Theobroma cacao TCM_026121 I 0.724
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.724
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.723
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.723
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.722
MDP0000290585 Malus domestica MDP0000290585 I 0.722
Pm015262 Prunus mume Pm015262 I 0.722
Bo4g190040 Brassica oleracea Bo4g190040 I 0.719
Bra017011 Brassica rapa Bra017011 I 0.719
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I 0.719
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.719
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.719
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.718
GLYMA12G32400 Glycine max GLYMA12G32400 I 0.718
GLYMA13G38030 Glycine max GLYMA13G38030 I 0.718
MLOC_66580 Hordeum vulgare MLOC_66580 I 0.717
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I 0.717
F775_02345 Aegilops tauschii F775_02345 I 0.717
Pavir.J22169 Panicum virgatum Pavir.J22169 I 0.717
Pavir.J25464 Panicum virgatum Pavir.J25464 I 0.717
Si024059m.g Setaria italica Si024059m.g I 0.717
DREB2C Oryza sativa OS08G0565200 I 0.716
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.716
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.716
OB08G30790 Oryza brachyantha OB08G30790 I 0.716
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I 0.716
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.716
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.716
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I 0.716
BGIOSGA026461 Oryza indica BGIOSGA026461 I 0.716
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.716
MLOC_12223 Hordeum vulgare MLOC_12223 I 0.714
PK16401.1 Cannabis sativa PK16401.1 N 0.712
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.711
LPERR08G12790 Leersia perrieri LPERR08G12790 I 0.711
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.711
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.709
Si002067m.g Setaria italica Si002067m.g I 0.709
Ca_22585 Cicer arietinum Ca_22585 I 0.708
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.708
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.706
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.705
Gorai.011G235900 Gossypium raimondii Gorai.011G235900 I 0.704
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.704
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.703
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I 0.703
F775_01779 Aegilops tauschii F775_01779 I 0.702
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.702
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.702
Bo9g177130 Brassica oleracea Bo9g177130 I 0.701
LPERR08G20650 Leersia perrieri LPERR08G20650 I 0.701
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.701
SELMODRAFT_38498 Selaginella moellendorffii SELMODRAFT_38498 N 0.699
SELMODRAFT_38500 Selaginella moellendorffii SELMODRAFT_38500 N 0.699
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.698
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.698
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.698
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.698
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.698
Cla022803 Citrullus lanatus Cla022803 I 0.698
Traes_2AL_3FB37A3E7 Triticum aestivum Traes_2AL_3FB37A3E7 I 0.697
TCM_043306 Theobroma cacao TCM_043306 I 0.697
TCM_043302 Theobroma cacao TCM_043302 I 0.697
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I 0.696
PK07829.1 Cannabis sativa PK07829.1 I 0.696
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.695
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.695
TCM_043275 Theobroma cacao TCM_043275 I 0.695
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.695
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.695
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.695
F775_05774 Aegilops tauschii F775_05774 I 0.695
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.695
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.695
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.694
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.693
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.693
Pm003634 Prunus mume Pm003634 I 0.693
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.693
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.691
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.691
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I 0.691
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.691
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.691
OB01G13930 Oryza brachyantha OB01G13930 I 0.691
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.691
OBART01G04210 Oryza barthii OBART01G04210 I 0.691
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.691
DREB2A Oryza sativa OS01G0165000 I 0.691
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.691
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.691
Cla012194 Citrullus lanatus Cla012194 I 0.691
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.689
TRIUR3_03342 Triticum urartu TRIUR3_03342 N 0.689
Bo9g155940 Brassica oleracea Bo9g155940 I 0.689
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.689
Bra002159 Brassica rapa Bra002159 I 0.689
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.689
DREB2G Arabidopsis thaliana AT5G18450 D 0.689
MTR_7g070220 Medicago truncatula MTR_7g070220 I 0.686
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.684
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.684
Ca_14133 Cicer arietinum Ca_14133 I 0.684
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.684
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.682
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.679
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.678
Bostr.13129s0423 Boechera stricta Bostr.13129s0423 I 0.677
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.677