BRADI3G12680 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI3G12680 T001322_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.694 0.796
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.680 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G12680.1 AP2 39 90

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA026461 Oryza indica BGIOSGA026461 I 0.790
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.790
OB08G30790 Oryza brachyantha OB08G30790 I 0.790
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I 0.790
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.790
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.790
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.790
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.790
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I 0.790
DREB2C Oryza sativa OS08G0565200 I 0.790
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I 0.790
F775_02345 Aegilops tauschii F775_02345 I 0.783
MLOC_66580 Hordeum vulgare MLOC_66580 I 0.783
Si024059m.g Setaria italica Si024059m.g I 0.783
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I 0.783
Pavir.J22169 Panicum virgatum Pavir.J22169 I 0.783
Pavir.J25464 Panicum virgatum Pavir.J25464 I 0.783
MLOC_12223 Hordeum vulgare MLOC_12223 I 0.781
LPERR08G20650 Leersia perrieri LPERR08G20650 I 0.775
F775_01779 Aegilops tauschii F775_01779 I 0.769
Traes_2AL_3FB37A3E7 Triticum aestivum Traes_2AL_3FB37A3E7 I 0.763
TRIUR3_03342 Triticum urartu TRIUR3_03342 N 0.756
LPERR08G12790 Leersia perrieri LPERR08G12790 I 0.749
MDP0000165880 Malus domestica MDP0000165880 I 0.729
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.728
Pm018989 Prunus mume Pm018989 I 0.728
MDP0000147009 Malus domestica MDP0000147009 I 0.728
MDP0000446783 Malus domestica MDP0000446783 I 0.728
TCM_026121 Theobroma cacao TCM_026121 I 0.725
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.724
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.721
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.721
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.721
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.717
GRMZM2G028386 Zea mays GRMZM2G028386 I 0.711
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.711
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I 0.710
Sb07g023575 Sorghum bicolor Sb07g023575 I 0.708
Cla022803 Citrullus lanatus Cla022803 I 0.705
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.705
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I 0.705
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.704
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.704
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.704
SELMODRAFT_38498 Selaginella moellendorffii SELMODRAFT_38498 N 0.701
SELMODRAFT_38500 Selaginella moellendorffii SELMODRAFT_38500 N 0.701
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I 0.700
mgf017629m Mimulus guttatus mgf017629m I 0.697
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.696
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.695
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.694
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.694
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.694
F775_32062 Aegilops tauschii F775_32062 I 0.692
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.692
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.692
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.692
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.692
Si022619m.g Setaria italica Si022619m.g I 0.690
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.690
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.690
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.687
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.687
Si002067m.g Setaria italica Si002067m.g I 0.686
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.686
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.685
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.685
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.684
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.684
MTR_3g112440 Medicago truncatula MTR_3g112440 I 0.681
DREB2G Arabidopsis thaliana AT5G18450 D 0.680
Bo9g155940 Brassica oleracea Bo9g155940 I 0.680
Bra002159 Brassica rapa Bra002159 I 0.680
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.680
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.680
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.680
Cla001755 Citrullus lanatus Cla001755 I 0.678
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.678
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.677