CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G006745
(
Zea mays
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GRMZM2G006745
T002071_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q1ESI9_MAIZE
M09714_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB2A_02
0.849
1.000
Q84ND8_HORVU
M09719_2.00
Hordeum vulgare
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DRF11_01
0.724
0.900
Q84JE9_HORVU
M09718_2.00
Hordeum vulgare
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DRF13_01
0.724
0.900
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH
DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.702
0.820
Q8H769_WHEAT
M09721_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1_01
0.688
0.800
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G006745_P01
AP2
83
134
CGYRGVRQRTWGKWVAEIREPNRVDRLWLGTFPTAEDAARAYDEAARAMYGD
GRMZM2G006745_P02
AP2
131
182
CGYRGVRQRTWGKWVAEIREPNRVDRLWLGTFPTAEDAARAYDEAARAMYGD
GRMZM2G006745_P03
AP2
12
63
CGYRGVRQRTWGKWVAEIREPNRVDRLWLGTFPTAEDAARAYDEAARAMYGD
GRMZM2G006745_P04
AP2
12
63
CGYRGVRQRTWGKWVAEIREPNRVDRLWLGTFPTAEDAARAYDEAARAMYGD
GRMZM2G006745_P06
AP2
12
63
CGYRGVRQRTWGKWVAEIREPNRVDRLWLGTFPTAEDAARAYDEAARAMYGD
Links
Other
AP2
family TFs
Other
Zea mays
TFs
98 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Q1ESI9_MAIZE
Zea mays
Q1ESI9_MAIZE
D
0.849
Sb09g016150
Sorghum bicolor
Sb09g016150
I
0.839
Pavir.Ca01725
Panicum virgatum
Pavir.Ca01725
I
0.834
Pavir.Cb01298
Panicum virgatum
Pavir.Cb01298
I
0.834
F775_32062
Aegilops tauschii
F775_32062
I
0.828
Traes_1AL_A9FB6BF52
Triticum aestivum
Traes_1AL_A9FB6BF52
I
0.828
Traes_1BL_BDF0801D01
Triticum aestivum
Traes_1BL_BDF0801D01
I
0.828
TRIUR3_17409
Triticum urartu
TRIUR3_17409
I
0.828
Si022619m.g
Setaria italica
Si022619m.g
I
0.804
Aquca_030_00214
Aquilegia coerulea
Aquca_030_00214
I
0.744
MDP0000165880
Malus domestica
MDP0000165880
I
0.744
gene21047-v1.0-hybrid
Fragaria vesca
gene21047-v1.0-hybrid
I
0.736
PRUPE_ppa007606mg
Prunus persica
PRUPE_ppa007606mg
I
0.735
Pm018989
Prunus mume
Pm018989
I
0.735
MDP0000147009
Malus domestica
MDP0000147009
I
0.735
MDP0000446783
Malus domestica
MDP0000446783
I
0.735
MLOC_77405
Hordeum vulgare
MLOC_77405
I
0.724
Q84JE9_HORVU
Hordeum vulgare
Q84JE9_HORVU
D
0.724
Q84ND8_HORVU
Hordeum vulgare
Q84ND8_HORVU
D
0.724
PRUPE_ppa022996mg
Prunus persica
PRUPE_ppa022996mg
I
0.723
VIT_13s0067g01960
Vitis vinifera
VIT_13s0067g01960
I
0.720
BRADI2G29960
Brachypodium distachyon
BRADI2G29960
I
0.716
SapurV1A.1286s0030
Salix purpurea
SapurV1A.1286s0030
I
0.714
SapurV1A.2268s0010
Salix purpurea
SapurV1A.2268s0010
I
0.714
Cla001755
Citrullus lanatus
Cla001755
I
0.708
Cucsa.119440
Cucumis sativus
Cucsa.119440
I
0.708
Traes_2BL_B397F2CE3
Triticum aestivum
Traes_2BL_B397F2CE3
I
0.704
Aquca_013_00679
Aquilegia coerulea
Aquca_013_00679
I
0.704
F775_02345
Aegilops tauschii
F775_02345
I
0.702
MLOC_66580
Hordeum vulgare
MLOC_66580
I
0.702
Si024059m.g
Setaria italica
Si024059m.g
I
0.702
Traes_2DL_B32203C91
Triticum aestivum
Traes_2DL_B32203C91
I
0.702
Pavir.J22169
Panicum virgatum
Pavir.J22169
I
0.702
Pavir.J25464
Panicum virgatum
Pavir.J25464
I
0.702
PK07402.1
Cannabis sativa
PK07402.1
D
0.702
BGIOSGA026461
Oryza indica
BGIOSGA026461
I
0.701
BGIOSGA026464
Oryza indica
BGIOSGA026464
I
0.701
LPERR05G09930
Leersia perrieri
LPERR05G09930
I
0.701
OB08G30790
Oryza brachyantha
OB08G30790
I
0.701
OGLUM08G25470
Oryza glumaepatula
OGLUM08G25470
I
0.701
OMERI08G18820
Oryza meridionalis
OMERI08G18820
I
0.701
ONIVA09G01190
Oryza nivara
ONIVA09G01190
I
0.701
OPUNC08G21890
Oryza punctata
OPUNC08G21890
I
0.701
ORGLA08G0193700
Oryza glaberrima
ORGLA08G0193700
I
0.701
ORUFI08G26490
Oryza rufipogon
ORUFI08G26490
I
0.701
DREB2C
Oryza sativa
OS08G0565200
I
0.701
POPTR_0010s19100
Populus trichocarpa
POPTR_0010s19100
I
0.700
MLOC_12223
Hordeum vulgare
MLOC_12223
I
0.699
cassava19475.valid.m1
Manihot esculenta
cassava19475.valid.m1
I
0.699
GSMUA_AchrUn_randomG14580_001
Musa acuminata
GSMUA_AchrUn_randomG14580_001
I
0.695
BRADI3G12680
Brachypodium distachyon
BRADI3G12680
I
0.694
OB05G20700
Oryza brachyantha
OB05G20700
I
0.694
TCM_026121
Theobroma cacao
TCM_026121
I
0.692
Bostr.23794s0027
Boechera stricta
Bostr.23794s0027
I
0.692
evm.TU.supercontig_19.121
Carica papaya
evm.TU.supercontig_19.121
I
0.692
LPERR08G12790
Leersia perrieri
LPERR08G12790
I
0.691
Cucsa.136780
Cucumis sativus
Cucsa.136780
I
0.691
GSMUA_Achr11G24820_001
Musa acuminata
GSMUA_Achr11G24820_001
I
0.690
POPTR_0008s07360
Populus trichocarpa
POPTR_0008s07360
I
0.690
Cla006713
Citrullus lanatus
Cla006713
I
0.690
29729.m002292
Ricinus communis
29729.m002292
I
0.690
Bo1g141310
Brassica oleracea
Bo1g141310
I
0.689
GSMUA_Achr9G04630_001
Musa acuminata
GSMUA_Achr9G04630_001
I
0.689
Traes_2AL_3FB37A3E7
Triticum aestivum
Traes_2AL_3FB37A3E7
I
0.689
F775_05774
Aegilops tauschii
F775_05774
I
0.688
MLOC_66686
Hordeum vulgare
MLOC_66686
I
0.688
Q8H769_WHEAT
Triticum aestivum
Q8H769_WHEAT
D
0.688
Traes_3AS_62742A0471
Triticum aestivum
Traes_3AS_62742A0471
I
0.688
TRAES3BF064700080CFD_g
Triticum aestivum
TRAES3BF064700080CFD_g
I
0.688
TRIUR3_17973
Triticum urartu
TRIUR3_17973
I
0.688
F775_01779
Aegilops tauschii
F775_01779
I
0.687
LPERR08G20650
Leersia perrieri
LPERR08G20650
I
0.686
SapurV1A.0673s0120
Salix purpurea
SapurV1A.0673s0120
I
0.685
SapurV1A.1420s0050
Salix purpurea
SapurV1A.1420s0050
I
0.685
Thhalv10016913m.g
Eutrema salsugineum
Thhalv10016913m.g
I
0.685
BRADI2G04000
Brachypodium distachyon
BRADI2G04000
I
0.684
LPERR01G03760
Leersia perrieri
LPERR01G03760
I
0.684
MTR_5g083340
Medicago truncatula
MTR_5g083340
I
0.684
PDK_20s1493381g003
Phoenix dactylifera
PDK_20s1493381g003
I
0.684
Eucgr.G03094
Eucalyptus grandis
Eucgr.G03094
I
0.682
BGIOSGA002846
Oryza indica
BGIOSGA002846
I
0.681
OB01G13930
Oryza brachyantha
OB01G13930
I
0.681
OBART01G04210
Oryza barthii
OBART01G04210
I
0.681
OGLUM01G04560
Oryza glumaepatula
OGLUM01G04560
I
0.681
OLONG_014228
Oryza longistaminata
OLONG_014228
I
0.681
OMERI01G04110
Oryza meridionalis
OMERI01G04110
I
0.681
ONIVA01G04630
Oryza nivara
ONIVA01G04630
I
0.681
OPUNC01G03970
Oryza punctata
OPUNC01G03970
I
0.681
ORGLA01G0037700
Oryza glaberrima
ORGLA01G0037700
I
0.681
ORUFI01G04360
Oryza rufipogon
ORUFI01G04360
I
0.681
DREB2A
Oryza sativa
OS01G0165000
I
0.681
Lus10023633.g
Linum usitatissimum
Lus10023633.g
I
0.680
Lus10034902.g
Linum usitatissimum
Lus10034902.g
I
0.680
Bra034159
Brassica rapa
Bra034159
I
0.679
GLYMA06G45680
Glycine max
GLYMA06G45680
I
0.679
Bra001386
Brassica rapa
Bra001386
I
0.677
Lus10010632.g
Linum usitatissimum
Lus10010632.g
I
0.677