OB05G20700 (Oryza brachyantha)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OB05G20700 T003019_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q84ND8_HORVU
M09719_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DRF11_01 		0.728 0.900
Q84JE9_HORVU
M09718_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DRF13_01 		0.728 0.900
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.694 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB05G20700.1 AP2 85 136

Links

Other AP2 family TFs
Other Oryza brachyantha TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR05G09930 Leersia perrieri LPERR05G09930 I 0.817
BGIOSGA018253 Oryza indica BGIOSGA018253 I 0.771
OGLUM05G13290 Oryza glumaepatula OGLUM05G13290 I 0.771
OLONG_017780 Oryza longistaminata OLONG_017780 I 0.771
OMERI05G11290 Oryza meridionalis OMERI05G11290 I 0.771
ONIVA05G13030 Oryza nivara ONIVA05G13030 I 0.771
OPUNC05G10700 Oryza punctata OPUNC05G10700 I 0.771
OBART05G12580 Oryza barthii OBART05G12580 I 0.763
ORGLA05G0107600 Oryza glaberrima ORGLA05G0107600 I 0.763
ORUFI05G13560 Oryza rufipogon ORUFI05G13560 I 0.761
MLOC_77405 Hordeum vulgare MLOC_77405 I 0.728
Q84JE9_HORVU Hordeum vulgare Q84JE9_HORVU D 0.728
Q84ND8_HORVU Hordeum vulgare Q84ND8_HORVU D 0.728
BRADI2G29960 Brachypodium distachyon BRADI2G29960 I 0.723
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.721
F775_32062 Aegilops tauschii F775_32062 I 0.702
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.702
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.702
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.702
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.696
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.696
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.696
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.694
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.694
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.694
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.686
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.686
Bo9g177130 Brassica oleracea Bo9g177130 I 0.684
Si022619m.g Setaria italica Si022619m.g I 0.680