OLONG_017780 (Oryza longistaminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OLONG_017780 T003359_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q84ND8_HORVU
M09719_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DRF11_01 		0.712 0.920
Q84JE9_HORVU
M09718_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DRF13_01 		0.712 0.920
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.682 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_017780-R1 AP2 87 138

Links

Other AP2 family TFs
Other Oryza longistaminata TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA018253 Oryza indica BGIOSGA018253 I 0.834
OGLUM05G13290 Oryza glumaepatula OGLUM05G13290 I 0.834
OMERI05G11290 Oryza meridionalis OMERI05G11290 I 0.834
ONIVA05G13030 Oryza nivara ONIVA05G13030 I 0.834
OPUNC05G10700 Oryza punctata OPUNC05G10700 I 0.834
OBART05G12580 Oryza barthii OBART05G12580 I 0.826
ORGLA05G0107600 Oryza glaberrima ORGLA05G0107600 I 0.826
ORUFI05G13560 Oryza rufipogon ORUFI05G13560 I 0.825
LPERR05G09930 Leersia perrieri LPERR05G09930 I 0.778
OB05G20700 Oryza brachyantha OB05G20700 I 0.771
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.729
BRADI2G29960 Brachypodium distachyon BRADI2G29960 I 0.727
MLOC_77405 Hordeum vulgare MLOC_77405 I 0.712
Q84JE9_HORVU Hordeum vulgare Q84JE9_HORVU D 0.712
Q84ND8_HORVU Hordeum vulgare Q84ND8_HORVU D 0.712
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.701
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.694
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.694
Bo9g177130 Brassica oleracea Bo9g177130 I 0.692
GLYMA12G32400 Glycine max GLYMA12G32400 I 0.684
GLYMA13G38030 Glycine max GLYMA13G38030 I 0.684
GLYMA12G11150 Glycine max GLYMA12G11150 I 0.683
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.682
PK07402.1 Cannabis sativa PK07402.1 D 0.682
F775_32062 Aegilops tauschii F775_32062 I 0.681
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.681
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.681
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.681
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.680
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.680
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.678
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.677