gene01985-v1.0-hybrid (Fragaria vesca)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gene01985-v1.0-hybrid T008353_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.753 0.898
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.703 0.837
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna01985.1-v1.0-hybrid AP2 65 116

Links

Other AP2 family TFs
Other Fragaria vesca TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.774
Pm015262 Prunus mume Pm015262 I 0.774
MDP0000290585 Malus domestica MDP0000290585 I 0.770
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.754
Cla006713 Citrullus lanatus Cla006713 I 0.753
PK07402.1 Cannabis sativa PK07402.1 D 0.753
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.751
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.750
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.746
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.745
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.743
TCM_043302 Theobroma cacao TCM_043302 I 0.742
TCM_043306 Theobroma cacao TCM_043306 I 0.742
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.740
TCM_043275 Theobroma cacao TCM_043275 I 0.739
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.739
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.739
Cla001755 Citrullus lanatus Cla001755 I 0.738
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.738
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.736
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.736
29729.m002292 Ricinus communis 29729.m002292 I 0.734
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.732
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.730
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.730
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.727
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.724
Gorai.011G235900 Gossypium raimondii Gorai.011G235900 I 0.723
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.721
Bo4g190040 Brassica oleracea Bo4g190040 I 0.720
Bra017011 Brassica rapa Bra017011 I 0.720
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.720
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.720
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.720
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.719
MDP0000165880 Malus domestica MDP0000165880 I 0.719
MDP0000147009 Malus domestica MDP0000147009 I 0.718
MDP0000446783 Malus domestica MDP0000446783 I 0.718
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.716
Pm018989 Prunus mume Pm018989 I 0.716
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.713
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.713
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.708
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.708
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.707
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.705
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.705
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.704
F775_05774 Aegilops tauschii F775_05774 I 0.703
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.703
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.703
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.703
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.703
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.703
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.701
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.701
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.700
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.700
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.698
OB01G13930 Oryza brachyantha OB01G13930 I 0.698
OBART01G04210 Oryza barthii OBART01G04210 I 0.698
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.698
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.698
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.698
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.698
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.698
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.698
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.698
DREB2A Oryza sativa OS01G0165000 I 0.698
MDP0000153866 Malus domestica MDP0000153866 I 0.698
Pm003634 Prunus mume Pm003634 I 0.697
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.695
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.692
Si002067m.g Setaria italica Si002067m.g I 0.692
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.692
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.692
GLYMA12G11150 Glycine max GLYMA12G11150 I 0.689
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.689
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.687
PK16401.1 Cannabis sativa PK16401.1 N 0.687
MDP0000880312 Malus domestica MDP0000880312 I 0.686
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.685
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.685
GLYMA12G32400 Glycine max GLYMA12G32400 I 0.684
GLYMA13G38030 Glycine max GLYMA13G38030 I 0.684
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.684
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.684
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.682
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.682
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.682
PK07829.1 Cannabis sativa PK07829.1 I 0.682
SapurV1A.0620s0100 Salix purpurea SapurV1A.0620s0100 I 0.680
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.678
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.678
Ca_12446 Cicer arietinum Ca_12446 I 0.678
mgf007881m Mimulus guttatus mgf007881m I 0.677
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.677