PGSC0003DMG400027117 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400027117 T004479_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.753 0.918
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.720 0.857
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.720 0.857
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.720 0.857
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.713 0.796
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.712 0.837
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.686 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400069733 AP2 81 132

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

226 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.806
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.757
PK07402.1 Cannabis sativa PK07402.1 D 0.753
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.752
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.745
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.743
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.743
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.741
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.741
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.739
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.739
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.739
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.737
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.737
Cla006713 Citrullus lanatus Cla006713 I 0.736
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.735
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.735
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.734
OB01G13930 Oryza brachyantha OB01G13930 I 0.734
OBART01G04210 Oryza barthii OBART01G04210 I 0.734
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.734
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.734
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.734
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.734
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.734
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.734
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.734
DREB2A Oryza sativa OS01G0165000 I 0.734
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.732
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.732
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.728
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.728
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.728
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.727
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.727
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.724
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.724
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.723
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.722
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.721
Pm003634 Prunus mume Pm003634 I 0.721
29729.m002292 Ricinus communis 29729.m002292 I 0.721
DREB2D Arabidopsis thaliana AT1G75490 D 0.720
Bo6g119660 Brassica oleracea Bo6g119660 I 0.720
Bra015840 Brassica rapa Bra015840 I 0.720
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.720
Si002067m.g Setaria italica Si002067m.g I 0.720
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.720
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.720
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.720
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.720
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.720
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.719
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.719
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.718
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.718
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.718
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.718
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.717
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.716
PK07829.1 Cannabis sativa PK07829.1 I 0.716
30170.m014115 Ricinus communis 30170.m014115 I 0.715
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.715
mgf017629m Mimulus guttatus mgf017629m I 0.715
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.715
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.715
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.714
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.714
Ca_12446 Cicer arietinum Ca_12446 I 0.714
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.714
mgf024545m Mimulus guttatus mgf024545m I 0.714
MDP0000250924 Malus domestica MDP0000250924 I 0.714
DREB2G Arabidopsis thaliana AT5G18450 D 0.713
Bo9g155940 Brassica oleracea Bo9g155940 I 0.713
Bra002159 Brassica rapa Bra002159 I 0.713
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.713
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.713
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.713
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.713
Bo2g083920 Brassica oleracea Bo2g083920 I 0.712
Bra008200 Brassica rapa Bra008200 I 0.712
F775_05774 Aegilops tauschii F775_05774 I 0.712
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.712
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.712
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.712
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.712
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.712
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.712
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.712
Aquca_004_00452 Aquilegia coerulea Aquca_004_00452 I 0.712
MDP0000290585 Malus domestica MDP0000290585 I 0.712
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.711
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.711
Pm015262 Prunus mume Pm015262 I 0.711
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.711
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.711
Cla021113 Citrullus lanatus Cla021113 I 0.710
Pm006274 Prunus mume Pm006274 I 0.710
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.710
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.709
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.709
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.708
Pm018989 Prunus mume Pm018989 I 0.708
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.708
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.708
Bo6g086320 Brassica oleracea Bo6g086320 I 0.707
Bra003752 Brassica rapa Bra003752 I 0.707
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.707
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.707
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.707
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.707
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.707
MDP0000141335 Malus domestica MDP0000141335 I 0.707
MDP0000295902 Malus domestica MDP0000295902 I 0.707
MDP0000153866 Malus domestica MDP0000153866 I 0.706
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.706
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.705
mgf007881m Mimulus guttatus mgf007881m I 0.705
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.703
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.702
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.702
MDP0000165880 Malus domestica MDP0000165880 I 0.702
POPTR_0006s10510 Populus trichocarpa POPTR_0006s10510 I 0.701
TCM_034132 Theobroma cacao TCM_034132 I 0.701
Lus10003581.g Linum usitatissimum Lus10003581.g I 0.701
SapurV1A.0620s0100 Salix purpurea SapurV1A.0620s0100 I 0.701
MDP0000147009 Malus domestica MDP0000147009 I 0.700
MDP0000446783 Malus domestica MDP0000446783 I 0.700
PGSC0003DMG401023951 Solanum tuberosum PGSC0003DMG401023951 I 0.699
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.699
TCM_026121 Theobroma cacao TCM_026121 I 0.698
TCM_043302 Theobroma cacao TCM_043302 I 0.697
TCM_043306 Theobroma cacao TCM_043306 I 0.697
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.696
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.696
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.696
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.696
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.696
Ca_10770 Cicer arietinum Ca_10770 I 0.696
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.696
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.695
POPTR_0016s13380 Populus trichocarpa POPTR_0016s13380 I 0.695
TCM_043275 Theobroma cacao TCM_043275 I 0.694
Bo2g016490 Brassica oleracea Bo2g016490 I 0.693
Bra023674 Brassica rapa Bra023674 I 0.693
GLYMA02G42960 Glycine max GLYMA02G42960 I 0.693
GLYMA14G06080 Glycine max GLYMA14G06080 I 0.693
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.693
Solyc06g050520.1 Solanum lycopersicum Solyc06g050520.1 I 0.693
Bo4g190040 Brassica oleracea Bo4g190040 I 0.691
Bra017011 Brassica rapa Bra017011 I 0.691
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.691
GLYMA07G19221 Glycine max GLYMA07G19221 I 0.691
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.691
MDP0000250927 Malus domestica MDP0000250927 I 0.689
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.688
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.688
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.686
PK08602.1 Cannabis sativa PK08602.1 D 0.686
BGIOSGA026461 Oryza indica BGIOSGA026461 I 0.685
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.685
GRMZM2G028386 Zea mays GRMZM2G028386 I 0.685
OB08G30790 Oryza brachyantha OB08G30790 I 0.685
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I 0.685
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.685
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.685
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.685
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.685
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I 0.685
DREB2C Oryza sativa OS08G0565200 I 0.685
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.685
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.685
Sb07g023575 Sorghum bicolor Sb07g023575 I 0.684
SapurV1A.0001s0300 Salix purpurea SapurV1A.0001s0300 I 0.684
MTR_3g112440 Medicago truncatula MTR_3g112440 I 0.683
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.682
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.682
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.682
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.682
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.682
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.682
OBART03G05550 Oryza barthii OBART03G05550 I 0.682
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.682
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.682
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.682
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.682
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.682
DREB2E Oryza sativa OS03G0174400 I 0.682
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.682
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.682
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.682
GLYMA18G43750 Glycine max GLYMA18G43750 I 0.681
MDP0000880312 Malus domestica MDP0000880312 I 0.681
chr1.LjT01D01.90.nd Lotus japonicus chr1.LjT01D01.90.nd I 0.681
Bo9g177130 Brassica oleracea Bo9g177130 I 0.680
Cla012194 Citrullus lanatus Cla012194 I 0.680
Bo3g013160 Brassica oleracea Bo3g013160 I 0.679
Bra006460 Brassica rapa Bra006460 I 0.679
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.679
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.679
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.679
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.679
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.679
TCM_024756 Theobroma cacao TCM_024756 I 0.679
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.679
Ca_07264 Cicer arietinum Ca_07264 I 0.679
27810.m000639 Ricinus communis 27810.m000639 I 0.679
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.679
cassava25887.m1 Manihot esculenta cassava25887.m1 I 0.679
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.679
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.679
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.679
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.679
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.679
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.679
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.679
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.679
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.679
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.678
Cla022803 Citrullus lanatus Cla022803 I 0.678
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.678
LPERR08G12790 Leersia perrieri LPERR08G12790 I 0.677
Cla001755 Citrullus lanatus Cla001755 I 0.677
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.677
Cucsa.130200 Cucumis sativus Cucsa.130200 I 0.677
Gorai.011G235900 Gossypium raimondii Gorai.011G235900 I 0.677