PK08602.1 (Cannabis sativa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 PK08602.1 T010065_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08602.1
M01098_2.00		 Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.755 0.880
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.695 0.780
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.683 0.760
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.683 0.760
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.683 0.760
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.681 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01098_2.00 AP2 28 79

DNA Binding Domains

Protein ID Domain From To Sequence
PK08602.1 AP2 28 79

Links

Other AP2 family TFs
Other Cannabis sativa TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.825
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.821
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.815
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.815
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.815
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.815
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.815
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.815
Ca_07264 Cicer arietinum Ca_07264 I 0.815
27810.m000639 Ricinus communis 27810.m000639 I 0.815
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.815
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.815
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.815
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.815
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.811
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.811
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.811
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.811
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.811
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.811
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.811
OBART03G05550 Oryza barthii OBART03G05550 I 0.811
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.811
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.811
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.811
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.811
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.811
DREB2E Oryza sativa OS03G0174400 I 0.811
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.811
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.811
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.808
Pm025865 Prunus mume Pm025865 I 0.808
MDP0000703626 Malus domestica MDP0000703626 I 0.808
MDP0000871361 Malus domestica MDP0000871361 I 0.808
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.807
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.807
TCM_024756 Theobroma cacao TCM_024756 I 0.805
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.805
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.805
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.804
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.801
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.799
Cla017778 Citrullus lanatus Cla017778 I 0.798
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.797
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.795
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.792
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.792
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.791
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.790
chr1.CM0318.570.nd Lotus japonicus chr1.CM0318.570.nd I 0.788
GLYMA19G04461 Glycine max GLYMA19G04461 I 0.771
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.767
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.764
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.764
Solyc10g080310.1 Solanum lycopersicum Solyc10g080310.1 I 0.762
Bo6g073020 Brassica oleracea Bo6g073020 I 0.759
Bo8g092010 Brassica oleracea Bo8g092010 I 0.758
Bra007341 Brassica rapa Bra007341 I 0.758
DREB2F Arabidopsis thaliana AT3G57600 D 0.755
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I 0.755
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.755
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.755
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.755
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.749
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.748
Bo4g111040 Brassica oleracea Bo4g111040 I 0.740
Bra014617 Brassica rapa Bra014617 I 0.740
mgf017629m Mimulus guttatus mgf017629m I 0.707
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.698
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.697
Pm003634 Prunus mume Pm003634 I 0.697
DREB2G Arabidopsis thaliana AT5G18450 D 0.695
Bo9g155940 Brassica oleracea Bo9g155940 I 0.695
Bra002159 Brassica rapa Bra002159 I 0.695
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.695
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.695
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.695
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.695
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.695
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.695
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.695
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.694
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.692
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.690
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.688
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.688
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.688
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.687
Bo2g016490 Brassica oleracea Bo2g016490 I 0.686
Bra023674 Brassica rapa Bra023674 I 0.686
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.686
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.686
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.686
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.684
OB01G13930 Oryza brachyantha OB01G13930 I 0.684
OBART01G04210 Oryza barthii OBART01G04210 I 0.684
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.684
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.684
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.684
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.684
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.684
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.684
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.684
DREB2A Oryza sativa OS01G0165000 I 0.684
30170.m014115 Ricinus communis 30170.m014115 I 0.684
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.684
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.684
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.684
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.684
AMTR_s00007p00053050 Amborella trichopoda AMTR_s00007p00053050 I 0.683
DREB2D Arabidopsis thaliana AT1G75490 D 0.683
Bo6g086320 Brassica oleracea Bo6g086320 I 0.683
Bo6g119660 Brassica oleracea Bo6g119660 I 0.683
Bra003752 Brassica rapa Bra003752 I 0.683
Bra015840 Brassica rapa Bra015840 I 0.683
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.683
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.683
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.683
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.683
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.683
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.683
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.683
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.683
Cucsa.130200 Cucumis sativus Cucsa.130200 I 0.682
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.682
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.681
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.681
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.681
mgf024545m Mimulus guttatus mgf024545m I 0.681
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.681
PK07402.1 Cannabis sativa PK07402.1 D 0.681
POPTR_0006s10510 Populus trichocarpa POPTR_0006s10510 I 0.680
SapurV1A.0001s0300 Salix purpurea SapurV1A.0001s0300 I 0.680
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.679
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.679
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.678
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.678
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.678
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.677
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.677