Eucgr.A02390 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.A02390 T008094_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.792 0.940
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.766 0.920
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.699 0.800
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.690 0.780
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.690 0.780
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.690 0.780
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.684 0.780
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.681 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.A02390.1 AP2 28 79

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.801
Ca_07264 Cicer arietinum Ca_07264 I 0.801
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.801
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.801
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.801
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.801
27810.m000639 Ricinus communis 27810.m000639 I 0.801
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.801
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.801
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.801
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.801
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.801
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.801
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.801
TCM_024756 Theobroma cacao TCM_024756 I 0.801
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.798
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.798
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.798
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.798
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.798
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.798
DREB2E Oryza sativa OS03G0174400 I 0.798
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.798
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.798
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.798
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.798
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.798
OBART03G05550 Oryza barthii OBART03G05550 I 0.798
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.798
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.798
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.798
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.795
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.795
MDP0000703626 Malus domestica MDP0000703626 I 0.795
MDP0000871361 Malus domestica MDP0000871361 I 0.795
Pm025865 Prunus mume Pm025865 I 0.795
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.793
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.793
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.793
PK08602.1 Cannabis sativa PK08602.1 D 0.792
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.792
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.791
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.791
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.788
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.787
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.786
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.779
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.773
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.773
Bo6g073020 Brassica oleracea Bo6g073020 I 0.773
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.773
Bo8g092010 Brassica oleracea Bo8g092010 I 0.773
Bra007341 Brassica rapa Bra007341 I 0.773
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.766
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.766
DREB2F Arabidopsis thaliana AT3G57600 D 0.766
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.766
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I 0.766
Cla017778 Citrullus lanatus Cla017778 I 0.765
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.763
chr1.CM0318.570.nd Lotus japonicus chr1.CM0318.570.nd I 0.762
GLYMA19G04461 Glycine max GLYMA19G04461 I 0.757
Solyc10g080310.1 Solanum lycopersicum Solyc10g080310.1 I 0.756
Bo4g111040 Brassica oleracea Bo4g111040 I 0.755
Bra014617 Brassica rapa Bra014617 I 0.755
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.750
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.740
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.717
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.708
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.707
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.704
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.704
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.701
Bra002159 Brassica rapa Bra002159 I 0.699
Bo9g155940 Brassica oleracea Bo9g155940 I 0.699
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.699
DREB2G Arabidopsis thaliana AT5G18450 D 0.699
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.699
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.699
Pm003634 Prunus mume Pm003634 I 0.698
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.698
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.698
mgf017629m Mimulus guttatus mgf017629m I 0.696
Bo6g086320 Brassica oleracea Bo6g086320 I 0.693
MDP0000250927 Malus domestica MDP0000250927 I 0.693
Bra003752 Brassica rapa Bra003752 I 0.693
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.692
30170.m014115 Ricinus communis 30170.m014115 I 0.692
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.692
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.692
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.692
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.692
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.692
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.691
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.690
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.690
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.690
Bra023674 Brassica rapa Bra023674 I 0.690
OB01G13930 Oryza brachyantha OB01G13930 I 0.690
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.690
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.690
Bra015840 Brassica rapa Bra015840 I 0.690
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.690
OBART01G04210 Oryza barthii OBART01G04210 I 0.690
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.690
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.690
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.690
DREB2A Oryza sativa OS01G0165000 I 0.690
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.690
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.690
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.690
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.690
DREB2D Arabidopsis thaliana AT1G75490 D 0.690
Bo2g016490 Brassica oleracea Bo2g016490 I 0.690
Bo6g119660 Brassica oleracea Bo6g119660 I 0.690
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.690
mgf024545m Mimulus guttatus mgf024545m I 0.689
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.688
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.688
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.688
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.687
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.685
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.684
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.684
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.684
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.684
PK07402.1 Cannabis sativa PK07402.1 D 0.684
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.683
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.683
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.683
Ca_10770 Cicer arietinum Ca_10770 I 0.683
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.683
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.683
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.683
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.683
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.683
Bo2g083920 Brassica oleracea Bo2g083920 I 0.682
Bra008200 Brassica rapa Bra008200 I 0.682
Cla012194 Citrullus lanatus Cla012194 I 0.682
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.681
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.681
F775_05774 Aegilops tauschii F775_05774 I 0.681
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.681
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.681
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.681
MDP0000141335 Malus domestica MDP0000141335 I 0.681
MDP0000295902 Malus domestica MDP0000295902 I 0.681
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.680
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.680
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.680
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.680
TCM_026121 Theobroma cacao TCM_026121 I 0.679
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.679
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.679
Pm006274 Prunus mume Pm006274 I 0.679
Cla021113 Citrullus lanatus Cla021113 I 0.679
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.678
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.678
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.678
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.678
Cla006713 Citrullus lanatus Cla006713 I 0.677
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.677