e_gw1.162.74.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 e_gw1.162.74.1 T007134_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.767 0.860
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.741 0.840
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.698 0.800
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.698 0.800
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.698 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.162.74.1 AP2 45 96

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.770
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.770
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.768
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.767
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.767
PK08602.1 Cannabis sativa PK08602.1 D 0.767
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.760
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.760
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.760
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.760
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.760
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.760
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.760
OBART03G05550 Oryza barthii OBART03G05550 I 0.760
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.760
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.760
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.760
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.760
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.760
DREB2E Oryza sativa OS03G0174400 I 0.760
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.760
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.760
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.760
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.760
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.758
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.758
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.758
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.758
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.758
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.758
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.758
Ca_07264 Cicer arietinum Ca_07264 I 0.758
Pm025865 Prunus mume Pm025865 I 0.758
27810.m000639 Ricinus communis 27810.m000639 I 0.758
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.758
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.758
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.758
MDP0000703626 Malus domestica MDP0000703626 I 0.758
MDP0000871361 Malus domestica MDP0000871361 I 0.758
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.758
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.756
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.755
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.754
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.750
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.750
TCM_024756 Theobroma cacao TCM_024756 I 0.748
Cla017778 Citrullus lanatus Cla017778 I 0.748
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.748
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.748
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.748
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.743
DREB2F Arabidopsis thaliana AT3G57600 D 0.741
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I 0.741
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.741
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.741
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.741
Bo4g111040 Brassica oleracea Bo4g111040 I 0.735
Bo8g092010 Brassica oleracea Bo8g092010 I 0.735
Bra007341 Brassica rapa Bra007341 I 0.735
Bra014617 Brassica rapa Bra014617 I 0.735
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.735
chr1.CM0318.570.nd Lotus japonicus chr1.CM0318.570.nd I 0.731
Bo6g073020 Brassica oleracea Bo6g073020 I 0.727
GLYMA19G04461 Glycine max GLYMA19G04461 I 0.726
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.722
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.722
Solyc10g080310.1 Solanum lycopersicum Solyc10g080310.1 I 0.721
Bo2g083920 Brassica oleracea Bo2g083920 I 0.704
Bra008200 Brassica rapa Bra008200 I 0.704
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.704
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.700
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.700
Pm003634 Prunus mume Pm003634 I 0.700
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.700
MDP0000141335 Malus domestica MDP0000141335 I 0.700
MDP0000295902 Malus domestica MDP0000295902 I 0.700
DREB2D Arabidopsis thaliana AT1G75490 D 0.698
Bo6g086320 Brassica oleracea Bo6g086320 I 0.698
Bo6g119660 Brassica oleracea Bo6g119660 I 0.698
Bra003752 Brassica rapa Bra003752 I 0.698
Bra015840 Brassica rapa Bra015840 I 0.698
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.698
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.698
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.698
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.698
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.698
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.698
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.696
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.696
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.696
Ca_10770 Cicer arietinum Ca_10770 I 0.696
Pm006274 Prunus mume Pm006274 I 0.696
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.696
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.696
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.695
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.694
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.693
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.693
MDP0000250927 Malus domestica MDP0000250927 I 0.693
Cla021113 Citrullus lanatus Cla021113 I 0.692
MDP0000250924 Malus domestica MDP0000250924 I 0.692
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.692
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.691
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.690
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.688
30170.m014115 Ricinus communis 30170.m014115 I 0.688
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.688
mgf017629m Mimulus guttatus mgf017629m I 0.688
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.688
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.688
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.687
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.686
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.684
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.684
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.684
TCM_034132 Theobroma cacao TCM_034132 I 0.683
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.681
mgf024545m Mimulus guttatus mgf024545m I 0.681
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.678
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.678
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.678