AMTR_s00022p00250320 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00022p00250320 T000356_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.821 0.980
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.752 0.860
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.691 0.760
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.685 0.780
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.685 0.780
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.685 0.780
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.684 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN11783 AP2 28 79

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

145 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.821
PK08602.1 Cannabis sativa PK08602.1 D 0.821
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.813
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.813
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.813
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.813
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.813
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.813
DREB2E Oryza sativa OS03G0174400 I 0.813
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.813
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.813
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.813
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.813
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.813
OBART03G05550 Oryza barthii OBART03G05550 I 0.813
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.813
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.813
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.811
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.811
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.811
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.811
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.811
Ca_07264 Cicer arietinum Ca_07264 I 0.811
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.811
27810.m000639 Ricinus communis 27810.m000639 I 0.811
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.811
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.811
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.811
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.811
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.807
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.807
MDP0000871361 Malus domestica MDP0000871361 I 0.804
MDP0000703626 Malus domestica MDP0000703626 I 0.804
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.804
Pm025865 Prunus mume Pm025865 I 0.804
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.803
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.803
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.803
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.802
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.802
TCM_024756 Theobroma cacao TCM_024756 I 0.802
Cla017778 Citrullus lanatus Cla017778 I 0.795
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.795
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.795
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.793
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.791
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.788
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.787
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.786
chr1.CM0318.570.nd Lotus japonicus chr1.CM0318.570.nd I 0.785
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.770
GLYMA19G04461 Glycine max GLYMA19G04461 I 0.767
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.763
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.763
Solyc10g080310.1 Solanum lycopersicum Solyc10g080310.1 I 0.758
Bra007341 Brassica rapa Bra007341 I 0.755
Bo6g073020 Brassica oleracea Bo6g073020 I 0.755
Bo8g092010 Brassica oleracea Bo8g092010 I 0.755
DREB2F Arabidopsis thaliana AT3G57600 D 0.752
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.752
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.752
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.752
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I 0.752
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.751
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.745
Bo4g111040 Brassica oleracea Bo4g111040 I 0.737
Bra014617 Brassica rapa Bra014617 I 0.737
mgf017629m Mimulus guttatus mgf017629m I 0.704
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.701
Pm003634 Prunus mume Pm003634 I 0.700
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.700
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.698
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.698
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.696
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.695
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.691
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.691
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.691
Bo9g155940 Brassica oleracea Bo9g155940 I 0.691
Bra002159 Brassica rapa Bra002159 I 0.691
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.691
DREB2G Arabidopsis thaliana AT5G18450 D 0.691
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.691
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.690
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.688
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.688
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.688
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.687
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.686
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.686
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.686
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.686
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.686
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.685
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.685
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.685
Bra003752 Brassica rapa Bra003752 I 0.685
Bra015840 Brassica rapa Bra015840 I 0.685
Bo6g119660 Brassica oleracea Bo6g119660 I 0.685
Bo6g086320 Brassica oleracea Bo6g086320 I 0.685
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.685
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.685
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.685
DREB2D Arabidopsis thaliana AT1G75490 D 0.685
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.684
PK07402.1 Cannabis sativa PK07402.1 D 0.684
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.683
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.683
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.683
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.683
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.683
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.683
DREB2A Oryza sativa OS01G0165000 I 0.683
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.683
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.683
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.683
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.683
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.683
OB01G13930 Oryza brachyantha OB01G13930 I 0.683
OBART01G04210 Oryza barthii OBART01G04210 I 0.683
Bra023674 Brassica rapa Bra023674 I 0.682
Bo2g016490 Brassica oleracea Bo2g016490 I 0.682
30170.m014115 Ricinus communis 30170.m014115 I 0.681
mgf024545m Mimulus guttatus mgf024545m I 0.681
AMTR_s00007p00053050 Amborella trichopoda AMTR_s00007p00053050 I 0.681
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.681
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.681
Cucsa.130200 Cucumis sativus Cucsa.130200 I 0.681
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.681
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.680
POPTR_0006s10510 Populus trichocarpa POPTR_0006s10510 I 0.680
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.679
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.679
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.679
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.679
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.678
TCM_026121 Theobroma cacao TCM_026121 I 0.678
SapurV1A.0001s0300 Salix purpurea SapurV1A.0001s0300 I 0.678
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.677
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.677
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.677
Bra008200 Brassica rapa Bra008200 I 0.677
MDP0000295902 Malus domestica MDP0000295902 I 0.677
MDP0000141335 Malus domestica MDP0000141335 I 0.677
Bo2g083920 Brassica oleracea Bo2g083920 I 0.677