MTR_7g070220 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_7g070220 T002932_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2A
M06655_2.00 		Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN
NNNNDRWGKCGGTKDHDNNNN		 Dap-seq
OMalley et al.(2016)
DREB2_col_a 		0.693 0.774
DREB2A
M06656_2.00 		Arabidopsis thaliana
NHNHMACCGMCWTWD
HWAWGKCGGTKDNDN		 Dap-seq
OMalley et al.(2016)
DREB2_colamp_a 		0.693 0.774
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES79603 AP2 76 134

Links

Other AP2 family TFs
Other Medicago truncatula TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_021596 Theobroma cacao TCM_021596 I 0.729
chr1.LjT01D01.90.nd Lotus japonicus chr1.LjT01D01.90.nd I 0.723
Bostr.13129s0423 Boechera stricta Bostr.13129s0423 I 0.708
GLYMA07G19221 Glycine max GLYMA07G19221 I 0.701
Cagra.7053s0020 Capsella grandiflora Cagra.7053s0020 I 0.697
Carubv10023556m.g Capsella rubella Carubv10023556m.g I 0.697
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.695
Pm018989 Prunus mume Pm018989 I 0.695
DREB2A Arabidopsis thaliana AT5G05410 D 0.693
DREB2A Arabidopsis lyrata fgenesh2_kg.6__469__AT5G05410.1 I 0.693
Cagra.1504s0045 Capsella grandiflora Cagra.1504s0045 I 0.693
Carubv10001099m.g Capsella rubella Carubv10001099m.g I 0.693
GLYMA18G43750 Glycine max GLYMA18G43750 I 0.692
cassava46663.m1 Manihot esculenta cassava46663.m1 I 0.690
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.690
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.686
MDP0000147009 Malus domestica MDP0000147009 I 0.686
MDP0000165880 Malus domestica MDP0000165880 I 0.686
MDP0000446783 Malus domestica MDP0000446783 I 0.686
Bo2g006960 Brassica oleracea Bo2g006960 I 0.681
Bra028759 Brassica rapa Bra028759 I 0.681
PGSC0003DMG401023951 Solanum tuberosum PGSC0003DMG401023951 I 0.678