TCM_021596 (Theobroma cacao)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 TCM_021596 T005618_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2A
M06655_2.00 		Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN
NNNNDRWGKCGGTKDHDNNNN		 Dap-seq
OMalley et al.(2016)
DREB2_col_a 		0.680 0.736
DREB2A
M06656_2.00 		Arabidopsis thaliana
NHNHMACCGMCWTWD
HWAWGKCGGTKDNDN		 Dap-seq
OMalley et al.(2016)
DREB2_colamp_a 		0.680 0.736
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY07075 AP2 200 259

Links

Other AP2 family TFs
Other Theobroma cacao TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA07G19221 Glycine max GLYMA07G19221 I 0.734
MTR_7g070220 Medicago truncatula MTR_7g070220 I 0.729
GLYMA18G43750 Glycine max GLYMA18G43750 I 0.724
chr1.LjT01D01.90.nd Lotus japonicus chr1.LjT01D01.90.nd I 0.723
PGSC0003DMG401023951 Solanum tuberosum PGSC0003DMG401023951 I 0.711
cassava46663.m1 Manihot esculenta cassava46663.m1 I 0.710
Solyc06g050520.1 Solanum lycopersicum Solyc06g050520.1 I 0.707
Cagra.7053s0020 Capsella grandiflora Cagra.7053s0020 I 0.694
Carubv10023556m.g Capsella rubella Carubv10023556m.g I 0.694
29820.m001008 Ricinus communis 29820.m001008 I 0.684
DREB2A Arabidopsis thaliana AT5G05410 D 0.680
DREB2A Arabidopsis lyrata fgenesh2_kg.6__469__AT5G05410.1 I 0.680
Bostr.13129s0423 Boechera stricta Bostr.13129s0423 I 0.680
Cagra.1504s0045 Capsella grandiflora Cagra.1504s0045 I 0.680
Carubv10001099m.g Capsella rubella Carubv10001099m.g I 0.680