29680.m001737 (Ricinus communis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 29680.m001737 T006705_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.733 0.837
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.706 0.816
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.706 0.816
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.706 0.816
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.681 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29680.m001737 AP2 31 82

Links

Other AP2 family TFs
Other Ricinus communis TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava25887.m1 Manihot esculenta cassava25887.m1 I 0.803
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.741
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.741
Lus10003581.g Linum usitatissimum Lus10003581.g I 0.739
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.736
DREB2G Arabidopsis thaliana AT5G18450 D 0.733
Bo9g155940 Brassica oleracea Bo9g155940 I 0.733
Bra002159 Brassica rapa Bra002159 I 0.733
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.733
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.733
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.733
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.731
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.727
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.727
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.727
mgf024545m Mimulus guttatus mgf024545m I 0.726
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.726
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.726
Pm006274 Prunus mume Pm006274 I 0.725
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.725
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.723
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.722
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.722
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.722
Ca_10770 Cicer arietinum Ca_10770 I 0.722
Cla021113 Citrullus lanatus Cla021113 I 0.722
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.722
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.721
30170.m014115 Ricinus communis 30170.m014115 I 0.721
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.721
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.721
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.721
TCM_034132 Theobroma cacao TCM_034132 I 0.720
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.720
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.720
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.719
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.718
Pm003634 Prunus mume Pm003634 I 0.717
Bo2g016490 Brassica oleracea Bo2g016490 I 0.714
Bra023674 Brassica rapa Bra023674 I 0.714
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.714
Bo3g013160 Brassica oleracea Bo3g013160 I 0.713
Bra006460 Brassica rapa Bra006460 I 0.713
MDP0000250924 Malus domestica MDP0000250924 I 0.713
Bo2g083920 Brassica oleracea Bo2g083920 I 0.711
Bra008200 Brassica rapa Bra008200 I 0.711
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.710
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.708
DREB2D Arabidopsis thaliana AT1G75490 D 0.706
Bo6g119660 Brassica oleracea Bo6g119660 I 0.706
Bra015840 Brassica rapa Bra015840 I 0.706
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.706
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.706
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.706
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.706
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.706
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.706
MDP0000141335 Malus domestica MDP0000141335 I 0.705
MDP0000295902 Malus domestica MDP0000295902 I 0.705
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.704
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.704
mgf017629m Mimulus guttatus mgf017629m I 0.704
MTR_3g112440 Medicago truncatula MTR_3g112440 I 0.703
Bo6g086320 Brassica oleracea Bo6g086320 I 0.702
Bra003752 Brassica rapa Bra003752 I 0.702
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.700
MDP0000250927 Malus domestica MDP0000250927 I 0.697
TCM_026121 Theobroma cacao TCM_026121 I 0.695
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.688
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I 0.688
Cla022803 Citrullus lanatus Cla022803 I 0.686
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.686
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.686
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.686
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.685
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.683
MDP0000880312 Malus domestica MDP0000880312 I 0.683
PK07402.1 Cannabis sativa PK07402.1 D 0.681
29729.m002292 Ricinus communis 29729.m002292 I 0.680
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.680
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.678
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.677
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.677