Ciclev10032029m.g (Citrus clementina)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Ciclev10032029m.g T008071_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.767 0.918
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.728 0.878
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.681 0.776
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.678 0.816
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.678 0.816
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.678 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10032029m AP2 78 129

Links

Other AP2 family TFs
Other Citrus clementina TFs

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_00042 Capronia coronata A1O1_00042 I 0.000
A1O3_02176 Capronia epimyces A1O3_02176 I 0.000
A1O5_03878 Cladophialophora psammophila A1O5_03878 I 0.000
A1O7_00358 Cladophialophora yegresii A1O7_00358 I 0.000
BDDG_09480 Blastomyces dermatitidis BDDG_09480 I 0.000
AFUA_2G01260 Aspergillus fumigatus CADAFUAG00003544 I 0.000
NFIA_033560 Neosartorya fischeri CADNFIAG00003609 I 0.000
CANTEDRAFT_107875 Candida tenuis CANTEDRAFT_107875 I 0.000
estExt_genewise1_human.C_chr_5.10129 Pichia stipitis estExt_genewise1_human.C_chr_5.10129 I 0.000
EURHEDRAFT_518478 Aspergillus ruber EURHEDRAFT_518478 I 0.000
G210_3997 Candida maltosa G210_3997 I 0.000
G647_00393 Cladophialophora carrionii G647_00393 I 0.000
H101_06801 Trichophyton interdigitale H101_06801 N 0.000
H102_08016 Trichophyton rubrum H102_08016 N 0.000
H105_08042 Trichophyton soudanense H105_08042 N 0.000
HCBG_04402 Histoplasma capsulatum HCBG_04402 I 0.000
HMPREF1541_02336 Cyphellophora europaea HMPREF1541_02336 I 0.000
KUCA_T00002265001 Kuraishia capsulata KUCA_T00002265001 I 0.000
MCYG_00180 Arthroderma otae MCYG_00180 N 0.000
MCYG_00180 Microsporum canis MCYG_00180 N 0.000
MGYG_00747 Microsporum gypseum MGYG_00747 N 0.000
PAS_chr3_0712 Komagataella pastoris PAS_chr3_0712 I 0.000
PGUG_02866 Candida guilliermondii PGUG_02866 I 0.000
PGUG_02866 Meyerozyma guilliermondii PGUG_02866 I 0.000
PICST_72282 Scheffersomyces stipitis PICST_72282 I 0.000
PV04_01709 Capronia semiimmersa PV04_01709 I 0.000
PV07_10364 Cladophialophora immunda PV07_10364 I 0.000
TEQG_02573 Trichophyton equinum TEQG_02573 N 0.000
TESG_02135 Trichophyton tonsurans TESG_02135 N 0.000
TRV_04480 Trichophyton verrucosum TRV_04480 N 0.000
XP_002492941.1 Pichia pastoris XP_002492941.1 I 0.000
Z517_08575 Fonsecaea pedrosoi Z517_08575 I 0.000
Z518_03696 Rhinocladiella mackenziei Z518_03696 I 0.000
Z519_03196 Cladophialophora bantiana Z519_03196 I 0.000