Gorai.007G271900 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.007G271900 T008596_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.735 0.837
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.723 0.857
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.723 0.857
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.723 0.857
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.704 0.837
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.682 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G271900.1 AP2 33 84

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

148 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R002718 Calypte anna Aan_R002718 I
Afo_R000376 Aptenodytes forsteri Afo_R000376 I
Alligator_sinensis_CCG007030.1 Alligator sinensis Alligator_sinensis_CCG007030.1 I
Alligator_sinensis_CCG016908.1 Alligator sinensis Alligator_sinensis_CCG016908.1 I
Brh_R005562 Buceros rhinoceros Brh_R005562 I
CapteG216503 Capitella teleta CapteG216503 I
ATF6 Anolis carolinensis ENSACAG00000001336 I
ATF6B Anolis carolinensis ENSACAG00000010535 I
ENSAMEG00000001631 Ailuropoda melanoleuca ENSAMEG00000001631 I
ENSAMEG00000002381 Ailuropoda melanoleuca ENSAMEG00000002381 I
ENSAMXG00000010343 Astyanax mexicanus ENSAMXG00000010343 I
ENSAPLG00000013950 Anas platyrhynchos ENSAPLG00000013950 I
ATF6 Bos taurus ENSBTAG00000005227 I
ATF6B Bos taurus ENSBTAG00000008794 I
ENSBTAP00000042742-D1 Bos grunniens ENSBTAP00000042742-D1 I
ATF6B Canis familiaris ENSCAFG00000000761 I
ATF6 Canis familiaris ENSCAFG00000013068 I
ATF6 Choloepus hoffmanni ENSCHOG00000009031 I
ATF6 Callithrix jacchus ENSCJAG00000004572 I
ATF6B Callithrix jacchus ENSCJAG00000036009 I
ATF6 Cavia porcellus ENSCPOG00000010325 I
ATF6B Cavia porcellus ENSCPOG00000023551 I
ENSCSAG00000002721 Chlorocebus sabaeus ENSCSAG00000002721 I
ENSCSAG00000009237 Chlorocebus sabaeus ENSCSAG00000009237 I
atf6 Danio rerio ENSDARG00000012656 I
ENSDNOG00000008226 Dasypus novemcinctus ENSDNOG00000008226 I
ATF6B Dasypus novemcinctus ENSDNOG00000042135 I
Atf6b Dipodomys ordii ENSDORG00000004227 I
ATF6B Equus caballus ENSECAG00000021507 I
ATF6 Equus caballus ENSECAG00000022307 I
ATF6 Erinaceus europaeus ENSEEUG00000000007 I
ATF6 Echinops telfairi ENSETEG00000004183 I
ENSFALG00000003490 Ficedula albicollis ENSFALG00000003490 I
ATF6B Felis catus ENSFCAG00000018408 I
ATF6 Felis catus ENSFCAG00000023651 I
ATF6 Homo sapiens ENSG00000118217 D
ATF6B Homo sapiens ENSG00000213676 D
atf6 Gasterosteus aculeatus ENSGACG00000011702 I
ENSGALG00000002658 Gallus gallus ENSGALG00000002658 I
ATF6B Gorilla gorilla ENSGGOG00000004870 I
ATF6 Gorilla gorilla ENSGGOG00000013807 I
ENSGMOG00000018033 Gadus morhua ENSGMOG00000018033 I
ENSLACG00000007649 Latimeria chalumnae ENSLACG00000007649 I
ENSLACG00000012831 Latimeria chalumnae ENSLACG00000012831 I
ATF6 Loxodonta africana ENSLAFG00000003622 I
ATF6B Loxodonta africana ENSLAFG00000020739 I
ENSLOCG00000001278 Lepisosteus oculatus ENSLOCG00000001278 I
ENSMEUG00000008122 Macropus eugenii ENSMEUG00000008122 I
ATF6 Meleagris gallopavo ENSMGAG00000005185 I
ATF6 Microcebus murinus ENSMICG00000000038 I
ATF6B Myotis lucifugus ENSMLUG00000026641 I
ATF6 Macaca mulatta ENSMMUG00000004049 I
ATF6B Macaca mulatta ENSMMUG00000015229 I
ATF6 Monodelphis domestica ENSMODG00000000980 I
ATF6B Monodelphis domestica ENSMODG00000014920 I
ENSMPUG00000003493 Mustela putorius furo ENSMPUG00000003493 I
ENSMPUG00000010305 Mustela putorius furo ENSMPUG00000010305 I
Atf6b Mus musculus ENSMUSG00000015461 I
Atf6 Mus musculus ENSMUSG00000026663 I
ENSNLEG00000006562 Nomascus leucogenys ENSNLEG00000006562 I
ENSNLEG00000014528 Nomascus leucogenys ENSNLEG00000014528 I
ATF6 Ornithorhynchus anatinus ENSOANG00000009735 I
ENSOARG00000010418 Ovis aries ENSOARG00000010418 I
ATF6 Oryctolagus cuniculus ENSOCUG00000007930 I
ATF6B Oryctolagus cuniculus ENSOCUG00000023089 I
ATF6 Otolemur garnettii ENSOGAG00000001917 I
ATF6B Otolemur garnettii ENSOGAG00000032721 I
ENSONIG00000002137 Oreochromis niloticus ENSONIG00000002137 I
ATF6B Ochotona princeps ENSOPRG00000019053 I
atf6 Oryzias latipes ENSORLG00000016676 I
ENSP00000356919 Macaca fascicularis ENSP00000356919 I
ENSP00000356919-D1 Bos grunniens ENSP00000356919-D1 I
ENSP00000364349 Macaca fascicularis ENSP00000364349 I
ENSPANG00000006897 Papio anubis ENSPANG00000006897 I
ENSPANG00000021910 Papio anubis ENSPANG00000021910 I
ATF6B Procavia capensis ENSPCAG00000009251 I
ENSPFOG00000018418 Poecilia formosa ENSPFOG00000018418 I
ENSPMAG00000007037 Petromyzon marinus ENSPMAG00000007037 I
ENSPPYG00000000589 Pongo abelii ENSPPYG00000000589 I
ENSPPYG00000016479 Pongo abelii ENSPPYG00000016479 I
ENSPSIG00000016522 Pelodiscus sinensis ENSPSIG00000016522 I
ATF6B Pan troglodytes ENSPTRG00000034357 I
ATF6B Pteropus vampyrus ENSPVAG00000005144 I
Atf6b Rattus norvegicus ENSRNOG00000000431 I
Atf6 Rattus norvegicus ENSRNOG00000024632 I
ENSSHAG00000005867 Sarcophilus harrisii ENSSHAG00000005867 I
ENSSHAG00000010010 Sarcophilus harrisii ENSSHAG00000010010 I
ATF6B Sus scrofa ENSSSCG00000001430 I
ATF6 Sus scrofa ENSSSCG00000006346 I
ENSSTOG00000027684 Ictidomys tridecemlineatus ENSSTOG00000027684 I
ATF6 Tupaia belangeri ENSTBEG00000015845 I
ATF6 Taeniopygia guttata ENSTGUG00000017057 I
atf6 Takifugu rubripes ENSTRUG00000006660 I
ENSTSYG00000002035 Tarsius syrichta ENSTSYG00000002035 I
ENSTSYG00000003325 Tarsius syrichta ENSTSYG00000003325 I
ATF6B Tursiops truncatus ENSTTRG00000005958 I
ATF6 Tursiops truncatus ENSTTRG00000008508 I
ATF6 Vicugna pacos ENSVPAG00000004732 I
ENSXMAG00000013231 Xiphophorus maculatus ENSXMAG00000013231 I
Gfo_R012350 Geospiza fortis Gfo_R012350 I
L798_08597 Zootermopsis nevadensis L798_08597 I
Myotis_brandtii_ATF6B_10007217 Myotis brandtii Myotis_brandtii_ATF6B_10007217 I
Myotis_brandtii_ATF6_10024274 Myotis brandtii Myotis_brandtii_ATF6_10024274 I
Ogr01669 Ophisaurus gracilis Ogr01669 I
Ogr11447 Ophisaurus gracilis Ogr11447 I
Pvit_13420 Pogona vitticeps Pvit_13420 I
Pvit_17701 Pogona vitticeps Pvit_17701 I
SMAR005991 Strigamia maritima SMAR005991 I
Tal_R013420 Tyto alba Tal_R013420 I
atf6 Xenopus tropicalis XB-GENE-983814 I
atf6.S Xenopus laevis XB-GENE-983817 I