CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.013G076100
(
Gossypium raimondii
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Gorai.013G076100
T008708_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.013G076100.1
AP2
122
173
KIPVGVRRRKWGKWAAEIRHPLEKTRIWLGTYDTLEDAARAYDAKKLEFEAL
Links
Other
AP2
family TFs
Other
Gossypium raimondii
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.3364s0010
Capsella grandiflora
Cagra.3364s0010
I
0.746
Carubv10021988m.g
Capsella rubella
Carubv10021988m.g
I
0.746
evm.TU.supercontig_1.178
Carica papaya
evm.TU.supercontig_1.178
I
0.691
Gorai.008G183300
Gossypium raimondii
Gorai.008G183300
I
0.729
TCM_011811
Theobroma cacao
TCM_011811
I
0.729