Pavir.Fa01379 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Fa01379 T009441_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fa01379.1.p AP2 92 143

Links

Other AP2 family TFs
Other Panicum virgatum TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA015463 Oryza indica BGIOSGA015463 N
F775_06449 Aegilops tauschii F775_06449 N
LPERR04G03760 Leersia perrieri LPERR04G03760 N
OB04G14360 Oryza brachyantha OB04G14360 N
OBART04G05590 Oryza barthii OBART04G05590 N
OGLUM04G05370 Oryza glumaepatula OGLUM04G05370 N
OLONG_011482 Oryza longistaminata OLONG_011482 N
ONIVA04G03920 Oryza nivara ONIVA04G03920 N
OPUNC04G04750 Oryza punctata OPUNC04G04750 N
ORUFI04G06460 Oryza rufipogon ORUFI04G06460 N
OS04G0266400 Oryza sativa OS04G0266400 N
Pavir.Gb02253 Panicum virgatum Pavir.Gb02253 N
Traes_2AS_FA50A29DB Triticum aestivum Traes_2AS_FA50A29DB N
Traes_2DS_AB825FECC Triticum aestivum Traes_2DS_AB825FECC N
TRIUR3_20569 Triticum urartu TRIUR3_20569 N