Pavir.Gb02253 (Panicum virgatum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Pavir.Gb02253 T261600_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Gb02253.1.p MBD 48 107
Pavir.Gb02253.1.p MBD 112 175
Pavir.Gb02253.1.p MBD 193 280

Links

Other MBD family TFs
Other Panicum virgatum TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC04G04750 Oryza punctata OPUNC04G04750 N 0.765
GRMZM2G126545 Zea mays GRMZM2G126545 N 0.765
ONIVA04G03920 Oryza nivara ONIVA04G03920 N 0.759
ORUFI04G06460 Oryza rufipogon ORUFI04G06460 N 0.759
BGIOSGA015463 Oryza indica BGIOSGA015463 N 0.759
OGLUM04G05370 Oryza glumaepatula OGLUM04G05370 N 0.759
OBART04G05590 Oryza barthii OBART04G05590 N 0.759
OS04G0266400 Oryza sativa OS04G0266400 N 0.741
OB04G14360 Oryza brachyantha OB04G14360 N 0.738
OLONG_011482 Oryza longistaminata OLONG_011482 N 0.736
Si010242m.g Setaria italica Si010242m.g N 0.727