CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G126545
(
Zea mays
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
GRMZM2G126545
T260608_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G126545_P01
MBD
98
157
DEPPGWLPDGWTMEVCQEDNGSIYKYYTSPMSGYMFTSKMETLHYLFSGVEERMLELQAS
GRMZM2G126545_P01
MBD
161
191
NELHESHTWLPRGWVIEVRAGGKKMDKMYKV
GRMZM2G126545_P02
MBD
83
142
DEPPGWLPDGWTMEVCQEDNGSIYKYYTSPMSGYMFTSKMETLHYLFSGVEERMLELQAS
GRMZM2G126545_P02
MBD
146
209
NELHESHTWLPRGWVIEVRAGGKKMDKMYKFYVHLPTGQRFLSKAEVLHFVNKGMVSTCDMDVL
GRMZM2G126545_P02
MBD
226
310
PDGLPDGWVKETISRKFNDGIRKDQYYTDPVSHRVFRTLKSVLSYLGTGEISRHSYLPRRNVIDMYSFDKCADLPKSMVKRLKAK
GRMZM2G126545_P03
MBD
83
142
DEPPGWLPDGWTMEVCQEDNGSIYKYYTSPMSGYMFTSKMETLHYLFSGVEERMLELQAS
GRMZM2G126545_P03
MBD
146
209
NELHESHTWLPRGWVIEVRAGGKKMDKMYKFYVHLPTGQRFLSKAEVLHFVNKGMVSTCDMDVL
GRMZM2G126545_P03
MBD
226
310
PDGLPDGWVKETISRKFNDGIRKDQYYTDPVSHRVFRTLKSVLSYLGTGEISRHSYLPRRNVIDMYSFDKCADLPKSMVKRLKAK
GRMZM2G126545_P04
MBD
83
142
DEPPGWLPDGWTMEVCQEDNGSIYKYYTSPMSGYMFTSKMETLHYLFSGVEERMLELQAS
GRMZM2G126545_P04
MBD
146
197
NELHESHTWLPRGWVIEVRAGGKKMDKMYKRFLSKAEVLHFVNKGMVSTCDM
GRMZM2G126545_P04
MBD
217
301
PDGLPDGWVKETISRKFNDGIRKDQYYTDPVSHRVFRTLKSVLSYLGTGEISRHSYLPRRNVIDMYSFDKCADLPKSMVKRLKAK
GRMZM2G126545_P05
MBD
77
136
DEPPGWLPDGWTMEVCQEDNGSIYKYYTSPMSGYMFTSKMETLHYLFSGVEERMLELQAS
GRMZM2G126545_P05
MBD
140
203
NELHESHTWLPRGWVIEVRAGGKKMDKMYKFYVHLPTGQRFLSKAEVLHFVNKGMVSTCDMDVL
GRMZM2G126545_P05
MBD
220
304
PDGLPDGWVKETISRKFNDGIRKDQYYTDPVSHRVFRTLKSVLSYLGTGEISRHSYLPRRNVIDMYSFDKCADLPKSMVKRLKAK
GRMZM2G126545_P06
MBD
27
122
PDGLPDGWVKETISRKFNDGIRKDQYYTDPVSHRVFRTLKSVLSYLGTGEISRHSYLPRRNVIDMYSFDKCADLPKSMVKRLKAKGQAKKKFMRAQ
Links
Other
MBD
family TFs
Other
Zea mays
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Gb02253
Panicum virgatum
Pavir.Gb02253
N
0.765
Pavir.J05467
Panicum virgatum
Pavir.J05467
N
0.722
OPUNC04G04750
Oryza punctata
OPUNC04G04750
N
0.704