CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J16910
(
Panicum virgatum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Pavir.J16910
T009581_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J16910.1.p
AP2
112
157
ESYRGVRLRKWGKWAAEIRNPFTGKRQWLGTFDTAGAASAAYLSAS
Links
Other
AP2
family TFs
Other
Panicum virgatum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAI57578
Xenopus tropicalis
AAI57578
N
AAI67525
Xenopus tropicalis
AAI67525
N
znf1128
Danio rerio
ENSDARG00000088961
N
si:dkey-7j22.2
Danio rerio
ENSDARG00000097091
N
BX324003.3
Danio rerio
ENSDARG00000099264
N
BX548067.2
Danio rerio
ENSDARG00000100523
N
ENSDARG00000102545
Danio rerio
ENSDARG00000102545
N
ENSDARG00000103604
Danio rerio
ENSDARG00000103604
N
si:dkey-3p4.8
Danio rerio
ENSDARG00000103779
N
ENSDARG00000104731
Danio rerio
ENSDARG00000104731
N
zgc:173619
Danio rerio
ENSDARG00000104741
N