CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J16910
(
Panicum virgatum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Pavir.J16910
T009581_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J16910.1.p
AP2
112
157
ESYRGVRLRKWGKWAAEIRNPFTGKRQWLGTFDTAGAASAAYLSAS
Links
Other
AP2
family TFs
Other
Panicum virgatum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G081892
Zea mays
GRMZM2G081892
N
0.755
Sb03g007200
Sorghum bicolor
Sb03g007200
N
0.755
Si002186m.g
Setaria italica
Si002186m.g
N
0.755
Si002714m.g
Setaria italica
Si002714m.g
N
0.755
Pavir.J19359
Panicum virgatum
Pavir.J19359
N
0.755
GRMZM2G129777
Zea mays
GRMZM2G129777
N
0.739