Thhalv10014566m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10014566m.g T009934_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF025
M06680_2.00 		Arabidopsis thaliana
NNNYYGCCGACANHN
NDNTGTCGGCRRNNN		 Dap-seq
OMalley et al.(2016)
Rap210_col_a 		0.730 0.959
ERF025
M06681_2.00 		Arabidopsis thaliana
NNNYNRCCGACANN
NNTGTCGGYNRNNN		 Dap-seq
OMalley et al.(2016)
Rap210_colamp_a 		0.730 0.959
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10014566m AP2 66 116

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMAR000164 Strigamia maritima SMAR000164 N
SMAR000181 Strigamia maritima SMAR000181 N
SMAR000290 Strigamia maritima SMAR000290 N
SMAR000430 Strigamia maritima SMAR000430 N
SMAR000499 Strigamia maritima SMAR000499 N
SMAR001236 Strigamia maritima SMAR001236 N
SMAR001729 Strigamia maritima SMAR001729 N
SMAR001843 Strigamia maritima SMAR001843 N
SMAR002013 Strigamia maritima SMAR002013 N
SMAR003133 Strigamia maritima SMAR003133 N
SMAR006219 Strigamia maritima SMAR006219 N
SMAR006326 Strigamia maritima SMAR006326 N
SMAR007256 Strigamia maritima SMAR007256 N
SMAR012386 Strigamia maritima SMAR012386 N
SMAR012441 Strigamia maritima SMAR012441 N