CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CPC735_054280
(
Coccidioides posadasii
)
APSES
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04383 (KilA-N)
IPR018004
CPC735_054280
T011841_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw1.5.76.1
M01652_2.00
Nectria haematococca
NNVTGCABNN
NNVTGCABNN
PBM
Weirauch et al.(2014)
pTH9267
0.876
0.927
HCAG_07413
M01651_2.00
Histoplasma capsulatum
NNNHRYDNNN
NNNHRYDNNN
PBM
Weirauch et al.(2014)
pTH9346
0.855
0.963
stuA
M01649_2.00
Aspergillus nidulans
NNTGCAKNNN
NNNMTGCANN
PBM
Weirauch et al.(2014)
pTH9236
0.728
0.915
stuA
M09761_2.00
Aspergillus nidulans
DBDCGCGWWB
VWWCGCGHVH
Transfac
Matys et al.(2006)
F$STUAP_01
0.728
0.915
For this family, TFs with SR scores >
0.650
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EER24058
APSES
145
231
FQVEAKGVCVARREDNHMINGTKLLNVAGMTRGRRDGILKSEKVRHVVKIGPMHLKGVWIPFERALEFANKEKITDLLYPLFVHNIG
Links
Other
APSES
family TFs
Other
Coccidioides posadasii
TFs
164 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.232760
Cucumis sativus
Cucsa.232760
N
0.000
gene09083-v1.0-hybrid
Fragaria vesca
gene09083-v1.0-hybrid
N
0.000
GLYMA04G04030
Glycine max
GLYMA04G04030
N
0.000
Gorai.002G131600
Gossypium raimondii
Gorai.002G131600
N
0.000
Lus10006483.g
Linum usitatissimum
Lus10006483.g
N
0.000
TCM_033870
Theobroma cacao
TCM_033870
N
0.000