CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.002G131600
(
Gossypium raimondii
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Gorai.002G131600
T023300_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.002G131600.1
B3
129
220
FIKSMLQSHVTGGFWLGLPVHFCKTNLPKRDEVMTLVDEEGHEYPTIYLAKKTGLSGGWKGFAVAHRLVDGDAIVFQLLQRTTFKVYIIRVK
Gorai.002G131600.2
B3
79
170
FIKSMLQSHVTGGFWLGLPVHFCKTNLPKRDEVMTLVDEEGHEYPTIYLAKKTGLSGGWKGFAVAHRLVDGDAIVFQLLQRTTFKVYIIRVK
Gorai.002G131600.3
B3
44
135
FIKSMLQSHVTGGFWLGLPVHFCKTNLPKRDEVMTLVDEEGHEYPTIYLAKKTGLSGGWKGFAVAHRLVDGDAIVFQLLQRTTFKVYIIRVK
Links
Other
B3
family TFs
Other
Gossypium raimondii
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_033870
Theobroma cacao
TCM_033870
N
0.870
Lus10006483.g
Linum usitatissimum
Lus10006483.g
N
0.793
PK09561.1
Cannabis sativa
PK09561.1
N
0.783
MTR_3g101520
Medicago truncatula
MTR_3g101520
N
0.772
Ciclev10002314m.g
Citrus clementina
Ciclev10002314m.g
N
0.772
orange1.1g026276m.g
Citrus sinensis
orange1.1g026276m.g
N
0.772
mgf008645m
Mimulus guttatus
mgf008645m
N
0.761
GLYMA04G04030
Glycine max
GLYMA04G04030
N
0.739
PRUPE_ppb024440mg
Prunus persica
PRUPE_ppb024440mg
N
0.739
GLYMA06G04200
Glycine max
GLYMA06G04200
N
0.728
Cucsa.232760
Cucumis sativus
Cucsa.232760
N
0.728
evm.TU.supercontig_62.23
Carica papaya
evm.TU.supercontig_62.23
N
0.728
Lus10009764.g
Linum usitatissimum
Lus10009764.g
N
0.728
Bo6g124000
Brassica oleracea
Bo6g124000
N
0.717
Bra035129
Brassica rapa
Bra035129
N
0.717
Bra035324
Brassica rapa
Bra035324
N
0.717
Ca_01536
Cicer arietinum
Ca_01536
N
0.717
Aquca_016_00429
Aquilegia coerulea
Aquca_016_00429
N
0.717
Bostr.19424s0744
Boechera stricta
Bostr.19424s0744
N
0.717
Carubv10014420m.g
Capsella rubella
Carubv10014420m.g
N
0.717
Eucgr.F02358
Eucalyptus grandis
Eucgr.F02358
N
0.717
SapurV1A.0361s0280
Salix purpurea
SapurV1A.0361s0280
N
0.717
Bo2g116250
Brassica oleracea
Bo2g116250
N
0.707
LPERR06G05590
Leersia perrieri
LPERR06G05590
N
0.707
PGSC0003DMG400025792
Solanum tuberosum
PGSC0003DMG400025792
N
0.707
Lus10014044.g
Linum usitatissimum
Lus10014044.g
N
0.707