CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bra035324
(
Brassica rapa
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Bra035324
T018929_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra035324.1-P
B3
126
217
FVKSMLQSHVSGGFWLGLPVHFCRSELQKQDGVITLIDEEGEEFETVYLAKRTGLSGGWLGFAVSHNLVYGDALVFELVRPTVFKVYITRVK
Links
Other
B3
family TFs
Other
Brassica rapa
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g116250
Brassica oleracea
Bo2g116250
N
0.989
Bostr.3148s0222
Boechera stricta
Bostr.3148s0222
N
0.815
AT5G42700
Arabidopsis thaliana
AT5G42700
N
0.772
Cagra.2329s0005
Capsella grandiflora
Cagra.2329s0005
N
0.772
Carubv10027266m.g
Capsella rubella
Carubv10027266m.g
N
0.772
fgenesh1_pm.C_scaffold_8000473
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_8000473
N
0.750
TCM_033870
Theobroma cacao
TCM_033870
N
0.750
Gorai.002G131600
Gossypium raimondii
Gorai.002G131600
N
0.717
PK09561.1
Cannabis sativa
PK09561.1
N
0.717
MTR_3g101520
Medicago truncatula
MTR_3g101520
N
0.707
Aquca_016_00429
Aquilegia coerulea
Aquca_016_00429
N
0.707
Lus10006483.g
Linum usitatissimum
Lus10006483.g
N
0.707